Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 AC092720.2-201ENST00000602388 1665 ntBASIC21.27■■□□□ 1
TRUB2O95900 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRUB2O95900 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.27■■□□□ 1
TRUB2O95900 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
TRUB2O95900 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.27■■□□□ 1
TRUB2O95900 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.27■□□□□ 0.99
TRUB2O95900 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
TRUB2O95900 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
TRUB2O95900 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.27■□□□□ 0.99
TRUB2O95900 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
TRUB2O95900 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC21.27■□□□□ 0.99
TRUB2O95900 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
TRUB2O95900 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRUB2O95900 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.26■□□□□ 0.99
TRUB2O95900 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRUB2O95900 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
TRUB2O95900 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
TRUB2O95900 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TRUB2O95900 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TRUB2O95900 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRUB2O95900 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TRUB2O95900 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.26■□□□□ 0.99
TRUB2O95900 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRUB2O95900 LSM12P1-201ENST00000411836 588 ntBASIC21.26■□□□□ 0.99
TRUB2O95900 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.26■□□□□ 0.99
TRUB2O95900 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC21.26■□□□□ 0.99
TRUB2O95900 AL356652.1-201ENST00000615962 565 ntBASIC21.26■□□□□ 0.99
TRUB2O95900 AL589743.5-201ENST00000616611 1050 ntBASIC21.26■□□□□ 0.99
TRUB2O95900 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
TRUB2O95900 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRUB2O95900 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRUB2O95900 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRUB2O95900 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRUB2O95900 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRUB2O95900 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRUB2O95900 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRUB2O95900 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TRUB2O95900 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
TRUB2O95900 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRUB2O95900 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRUB2O95900 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
TRUB2O95900 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.25■□□□□ 0.99
TRUB2O95900 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.25■□□□□ 0.99
TRUB2O95900 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRUB2O95900 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRUB2O95900 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRUB2O95900 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.25■□□□□ 0.99
TRUB2O95900 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRUB2O95900 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.25■□□□□ 0.99
TRUB2O95900 KRT8P36-201ENST00000489121 1440 ntBASIC21.25■□□□□ 0.99
TRUB2O95900 AL512408.1-201ENST00000569378 2000 ntBASIC21.25■□□□□ 0.99
TRUB2O95900 MIR4758-201ENST00000577688 71 ntBASIC21.25■□□□□ 0.99
TRUB2O95900 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRUB2O95900 AC092118.2-201ENST00000613495 667 ntBASIC21.25■□□□□ 0.99
TRUB2O95900 AC105020.6-201ENST00000621523 1217 ntBASIC21.25■□□□□ 0.99
TRUB2O95900 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21.25■□□□□ 0.99
TRUB2O95900 AL162377.1-201ENST00000618844 1793 ntBASIC21.25■□□□□ 0.99
TRUB2O95900 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRUB2O95900 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRUB2O95900 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRUB2O95900 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRUB2O95900 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRUB2O95900 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
TRUB2O95900 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
TRUB2O95900 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRUB2O95900 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRUB2O95900 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRUB2O95900 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
TRUB2O95900 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
TRUB2O95900 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.24■□□□□ 0.99
TRUB2O95900 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.24■□□□□ 0.99
TRUB2O95900 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC21.24■□□□□ 0.99
TRUB2O95900 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TRUB2O95900 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.24■□□□□ 0.99
TRUB2O95900 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRUB2O95900 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRUB2O95900 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRUB2O95900 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.24■□□□□ 0.99
TRUB2O95900 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
TRUB2O95900 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRUB2O95900 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.23■□□□□ 0.99
TRUB2O95900 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRUB2O95900 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TRUB2O95900 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
TRUB2O95900 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.23■□□□□ 0.99
TRUB2O95900 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRUB2O95900 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRUB2O95900 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
TRUB2O95900 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
TRUB2O95900 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.23■□□□□ 0.99
TRUB2O95900 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
TRUB2O95900 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.23■□□□□ 0.99
TRUB2O95900 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.23■□□□□ 0.99
TRUB2O95900 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.23■□□□□ 0.99
TRUB2O95900 AC098934.4-201ENST00000564127 592 ntBASIC21.23■□□□□ 0.99
TRUB2O95900 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRUB2O95900 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
TRUB2O95900 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRUB2O95900 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRUB2O95900 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms