Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
CTNND1O60716 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CTNND1O60716 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CTNND1O60716 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC23.8■■□□□ 1.4
CTNND1O60716 AC023632.3-201ENST00000521633 145 ntBASIC23.8■■□□□ 1.4
CTNND1O60716 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
CTNND1O60716 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CTNND1O60716 AC027702.1-201ENST00000563810 1770 ntBASIC23.8■■□□□ 1.4
CTNND1O60716 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC23.8■■□□□ 1.4
CTNND1O60716 LSR-203ENST00000360798 1963 ntTSL 2 BASIC23.8■■□□□ 1.4
CTNND1O60716 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CTNND1O60716 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC23.79■■□□□ 1.4
CTNND1O60716 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CTNND1O60716 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
CTNND1O60716 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC23.79■■□□□ 1.4
CTNND1O60716 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CTNND1O60716 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CTNND1O60716 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CTNND1O60716 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC23.79■■□□□ 1.4
CTNND1O60716 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC23.79■■□□□ 1.4
CTNND1O60716 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC23.79■■□□□ 1.4
CTNND1O60716 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC23.79■■□□□ 1.4
CTNND1O60716 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC23.79■■□□□ 1.4
CTNND1O60716 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CTNND1O60716 AL121829.2-201ENST00000620908 328 ntBASIC23.79■■□□□ 1.4
CTNND1O60716 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CTNND1O60716 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC23.79■■□□□ 1.4
CTNND1O60716 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC23.79■■□□□ 1.4
CTNND1O60716 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CTNND1O60716 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC23.79■■□□□ 1.4
CTNND1O60716 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CTNND1O60716 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CTNND1O60716 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
CTNND1O60716 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC23.78■■□□□ 1.4
CTNND1O60716 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
CTNND1O60716 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CTNND1O60716 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC23.78■■□□□ 1.4
CTNND1O60716 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CTNND1O60716 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CTNND1O60716 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CTNND1O60716 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC23.78■■□□□ 1.4
CTNND1O60716 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CTNND1O60716 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC23.78■■□□□ 1.4
CTNND1O60716 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC23.78■■□□□ 1.4
CTNND1O60716 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
CTNND1O60716 AC244015.2-201ENST00000616358 1861 ntBASIC23.78■■□□□ 1.4
CTNND1O60716 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CTNND1O60716 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CTNND1O60716 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC23.78■■□□□ 1.4
CTNND1O60716 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CTNND1O60716 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CTNND1O60716 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CTNND1O60716 STAC-204ENST00000457375 1366 ntTSL 2 BASIC23.78■■□□□ 1.4
CTNND1O60716 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC23.77■■□□□ 1.4
CTNND1O60716 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CTNND1O60716 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC23.77■■□□□ 1.4
CTNND1O60716 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CTNND1O60716 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC23.77■■□□□ 1.4
CTNND1O60716 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC23.77■■□□□ 1.4
CTNND1O60716 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CTNND1O60716 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC23.77■■□□□ 1.4
CTNND1O60716 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC23.77■■□□□ 1.4
CTNND1O60716 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC23.77■■□□□ 1.4
CTNND1O60716 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC23.77■■□□□ 1.4
CTNND1O60716 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC23.77■■□□□ 1.4
CTNND1O60716 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CTNND1O60716 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CTNND1O60716 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CTNND1O60716 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
CTNND1O60716 KRT8P36-201ENST00000489121 1440 ntBASIC23.76■■□□□ 1.39
CTNND1O60716 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CTNND1O60716 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CTNND1O60716 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
CTNND1O60716 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CTNND1O60716 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC23.76■■□□□ 1.39
CTNND1O60716 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CTNND1O60716 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC23.76■■□□□ 1.39
CTNND1O60716 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CTNND1O60716 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC23.76■■□□□ 1.39
CTNND1O60716 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
CTNND1O60716 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
CTNND1O60716 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC23.76■■□□□ 1.39
CTNND1O60716 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CTNND1O60716 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC23.76■■□□□ 1.39
CTNND1O60716 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CTNND1O60716 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CTNND1O60716 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CTNND1O60716 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC23.75■■□□□ 1.39
CTNND1O60716 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC23.75■■□□□ 1.39
CTNND1O60716 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
CTNND1O60716 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
CTNND1O60716 TSPY15P-201ENST00000457163 923 ntBASIC23.75■■□□□ 1.39
CTNND1O60716 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC23.75■■□□□ 1.39
CTNND1O60716 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC23.75■■□□□ 1.39
CTNND1O60716 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC23.75■■□□□ 1.39
CTNND1O60716 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC23.75■■□□□ 1.39
CTNND1O60716 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC23.75■■□□□ 1.39
CTNND1O60716 PENK-204ENST00000518770 863 ntTSL 2 BASIC23.75■■□□□ 1.39
CTNND1O60716 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CTNND1O60716 SNX21-213ENST00000614929 587 ntTSL 5 BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms