Protein–RNA interactions for Protein: Q6PIF2

SYCE2, Synaptonemal complex central element protein 2, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE2Q6PIF2 XRN2-201ENST00000377191 3437 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
SYCE2Q6PIF2 ITSN2-202ENST00000361999 5814 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
SYCE2Q6PIF2 CDC42SE2-208ENST00000505065 4352 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
SYCE2Q6PIF2 AL445665.1-201ENST00000322495 2599 ntTSL 2 BASIC8.82□□□□□ -1
SYCE2Q6PIF2 ZNF780B-201ENST00000221355 3538 ntTSL 2 BASIC8.82□□□□□ -1
SYCE2Q6PIF2 CTAGE9-201ENST00000314099 2334 ntAPPRIS P1 BASIC8.82□□□□□ -1
SYCE2Q6PIF2 LINC01915-201ENST00000577994 2321 ntTSL 2 BASIC8.82□□□□□ -1
SYCE2Q6PIF2 LBR-201ENST00000272163 3745 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
SYCE2Q6PIF2 SOX5-210ENST00000537393 2769 ntTSL 5 BASIC8.82□□□□□ -1
SYCE2Q6PIF2 LIMCH1-218ENST00000513024 5129 ntTSL 1 (best) BASIC8.82□□□□□ -1
SYCE2Q6PIF2 AL360295.1-201ENST00000425435 1824 ntTSL 1 (best) BASIC8.82□□□□□ -1
SYCE2Q6PIF2 SNX20-203ENST00000423026 2156 ntTSL 1 (best) BASIC8.82□□□□□ -1
SYCE2Q6PIF2 AEBP2-202ENST00000360995 2533 ntAPPRIS ALT2 TSL 2 BASIC8.82□□□□□ -1
SYCE2Q6PIF2 JAKMIP2-202ENST00000333010 2992 ntTSL 2 BASIC8.82□□□□□ -1
SYCE2Q6PIF2 CREM-212ENST00000374728 1933 ntTSL 5 BASIC8.82□□□□□ -1
SYCE2Q6PIF2 ELAVL2-203ENST00000380117 2370 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
SYCE2Q6PIF2 AC009948.1-205ENST00000453026 2007 ntTSL 3 BASIC8.81□□□□□ -1
SYCE2Q6PIF2 KIF6-202ENST00000287152 9082 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
SYCE2Q6PIF2 CEACAM5-208ENST00000615021 1694 ntTSL 1 (best) BASIC8.81□□□□□ -1
SYCE2Q6PIF2 ZNF502-204ENST00000449836 3173 ntAPPRIS P1 TSL 3 BASIC8.81□□□□□ -1
SYCE2Q6PIF2 AC009403.2-202ENST00000636307 3956 ntTSL 5 BASIC8.81□□□□□ -1
SYCE2Q6PIF2 ALDH1L2-201ENST00000258494 7547 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
SYCE2Q6PIF2 NOL11-201ENST00000253247 2947 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
SYCE2Q6PIF2 ITPRIPL1-201ENST00000361124 4295 ntBASIC8.81□□□□□ -1
SYCE2Q6PIF2 RCAN1-208ENST00000482533 2686 ntTSL 1 (best) BASIC8.81□□□□□ -1
SYCE2Q6PIF2 ZSCAN23-201ENST00000289788 3126 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
SYCE2Q6PIF2 SIMC1-201ENST00000332772 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
SYCE2Q6PIF2 SUN1-203ENST00000401592 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
SYCE2Q6PIF2 SLC30A8-201ENST00000427715 5430 ntTSL 2 BASIC8.81□□□□□ -1
SYCE2Q6PIF2 ZRANB2-202ENST00000370920 3078 ntAPPRIS P4 TSL 1 (best) BASIC8.81□□□□□ -1
SYCE2Q6PIF2 ITK-201ENST00000422843 4528 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
SYCE2Q6PIF2 GIGYF2-201ENST00000373563 5847 ntTSL 1 (best) BASIC8.81□□□□□ -1
SYCE2Q6PIF2 Z97985.1-201ENST00000332270 946 ntBASIC8.81□□□□□ -1
SYCE2Q6PIF2 RN7SKP1-201ENST00000365525 307 ntBASIC8.81□□□□□ -1
SYCE2Q6PIF2 RPL34-201ENST00000394665 529 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
SYCE2Q6PIF2 RN7SKP89-201ENST00000410774 242 ntBASIC8.81□□□□□ -1
SYCE2Q6PIF2 LINC01799-201ENST00000411701 386 ntTSL 3 BASIC8.81□□□□□ -1
SYCE2Q6PIF2 AGBL5-IT1-201ENST00000411862 339 ntTSL 3 BASIC8.81□□□□□ -1
SYCE2Q6PIF2 RPE-204ENST00000411934 792 ntTSL 1 (best) BASIC8.81□□□□□ -1
SYCE2Q6PIF2 AL022724.1-201ENST00000412132 554 ntTSL 3 BASIC8.81□□□□□ -1
SYCE2Q6PIF2 HCG21-204ENST00000419481 605 ntTSL 3 BASIC8.81□□□□□ -1
SYCE2Q6PIF2 PUDPP1-201ENST00000421058 495 ntBASIC8.81□□□□□ -1
SYCE2Q6PIF2 ASS1P5-201ENST00000435496 1239 ntBASIC8.81□□□□□ -1
SYCE2Q6PIF2 RPS19P6-201ENST00000441327 433 ntBASIC8.81□□□□□ -1
SYCE2Q6PIF2 GGT3P-203ENST00000445651 368 ntTSL 2 BASIC8.81□□□□□ -1
SYCE2Q6PIF2 FGF12-206ENST00000450716 768 ntTSL 5 BASIC8.81□□□□□ -1
SYCE2Q6PIF2 AL353194.1-201ENST00000451507 441 ntTSL 2 BASIC8.81□□□□□ -1
SYCE2Q6PIF2 AL035660.2-201ENST00000461248 556 ntTSL 2 BASIC8.81□□□□□ -1
SYCE2Q6PIF2 RN7SL815P-201ENST00000470970 290 ntBASIC8.81□□□□□ -1
SYCE2Q6PIF2 AC084017.1-201ENST00000483240 860 ntBASIC8.81□□□□□ -1
SYCE2Q6PIF2 RPL22-207ENST00000484532 449 ntTSL 2 BASIC8.81□□□□□ -1
SYCE2Q6PIF2 RPL34-204ENST00000502534 560 ntAPPRIS P1 TSL 4 BASIC8.81□□□□□ -1
SYCE2Q6PIF2 ATOX1-206ENST00000522710 591 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
SYCE2Q6PIF2 PDCD6IPP2-205ENST00000565892 498 ntTSL 2 BASIC8.81□□□□□ -1
SYCE2Q6PIF2 RN7SL376P-201ENST00000578594 264 ntBASIC8.81□□□□□ -1
SYCE2Q6PIF2 AC015818.5-201ENST00000578659 356 ntBASIC8.81□□□□□ -1
SYCE2Q6PIF2 MIR3714-201ENST00000579507 65 ntBASIC8.81□□□□□ -1
SYCE2Q6PIF2 RN7SL619P-201ENST00000581753 258 ntBASIC8.81□□□□□ -1
SYCE2Q6PIF2 AC091147.1-201ENST00000583290 510 ntBASIC8.81□□□□□ -1
SYCE2Q6PIF2 AC090774.2-201ENST00000584708 322 ntBASIC8.81□□□□□ -1
SYCE2Q6PIF2 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC8.81□□□□□ -1
SYCE2Q6PIF2 AC011474.3-201ENST00000587520 250 ntTSL 5 BASIC8.81□□□□□ -1
SYCE2Q6PIF2 AC007346.1-202ENST00000602826 684 ntBASIC8.81□□□□□ -1
SYCE2Q6PIF2 AC006238.1-201ENST00000609787 534 ntBASIC8.81□□□□□ -1
SYCE2Q6PIF2 AC084876.1-201ENST00000612793 641 ntBASIC8.81□□□□□ -1
SYCE2Q6PIF2 AC131159.2-201ENST00000613236 702 ntBASIC8.81□□□□□ -1
SYCE2Q6PIF2 SMIM11B-203ENST00000622934 1193 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
SYCE2Q6PIF2 COPB1-202ENST00000439561 3382 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
SYCE2Q6PIF2 INTS4-211ENST00000535943 1382 ntTSL 5 BASIC8.81□□□□□ -1
SYCE2Q6PIF2 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
SYCE2Q6PIF2 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
SYCE2Q6PIF2 SLC28A2-201ENST00000347644 4374 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
SYCE2Q6PIF2 ZBTB18-202ENST00000622512 3740 ntAPPRIS ALT1 TSL 3 BASIC8.81□□□□□ -1
SYCE2Q6PIF2 AL392183.1-201ENST00000606622 2436 ntTSL 4 BASIC8.81□□□□□ -1
SYCE2Q6PIF2 OR5H1-202ENST00000641874 5999 ntAPPRIS P1 BASIC8.81□□□□□ -1
SYCE2Q6PIF2 CPB1-208ENST00000491148 1773 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
SYCE2Q6PIF2 CEP63-202ENST00000337090 5632 ntAPPRIS P3 TSL 5 BASIC8.81□□□□□ -1
SYCE2Q6PIF2 USF3-201ENST00000316407 13708 ntAPPRIS P2 TSL 5 BASIC8.81□□□□□ -1
SYCE2Q6PIF2 AP003027.1-202ENST00000366160 2076 ntBASIC8.81□□□□□ -1
SYCE2Q6PIF2 FLJ31356-202ENST00000445878 3001 ntTSL 4 BASIC8.8□□□□□ -1
SYCE2Q6PIF2 SPATA31D1-201ENST00000344803 4833 ntAPPRIS P1 TSL 2 BASIC8.8□□□□□ -1
SYCE2Q6PIF2 CFI-207ENST00000618244 1345 ntTSL 5 BASIC8.8□□□□□ -1
SYCE2Q6PIF2 CEP85-209ENST00000640292 2286 ntAPPRIS ALT1 TSL 5 BASIC8.8□□□□□ -1
SYCE2Q6PIF2 GLE1-201ENST00000309971 3321 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
SYCE2Q6PIF2 AF064858.1-201ENST00000417335 1412 ntTSL 5 BASIC8.8□□□□□ -1
SYCE2Q6PIF2 IYD-201ENST00000229447 7513 ntTSL 1 (best) BASIC8.8□□□□□ -1
SYCE2Q6PIF2 PDE6A-201ENST00000255266 5642 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
SYCE2Q6PIF2 PRICKLE2-AS1-201ENST00000482609 6505 ntTSL 1 (best) BASIC8.8□□□□□ -1
SYCE2Q6PIF2 MCM8-202ENST00000378883 3574 ntTSL 1 (best) BASIC8.8□□□□□ -1
SYCE2Q6PIF2 ZNF185-202ENST00000318529 3878 ntAPPRIS ALT2 TSL 2 BASIC8.8□□□□□ -1
SYCE2Q6PIF2 SMIM12-204ENST00000446026 2817 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
SYCE2Q6PIF2 ZNF343-201ENST00000278772 3632 ntAPPRIS P3 TSL 2 BASIC8.8□□□□□ -1
SYCE2Q6PIF2 KLHL32-205ENST00000539200 3600 ntTSL 2 BASIC8.8□□□□□ -1
SYCE2Q6PIF2 SERPINB12-201ENST00000269491 1218 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
SYCE2Q6PIF2 AC096664.1-201ENST00000393996 778 ntBASIC8.8□□□□□ -1
SYCE2Q6PIF2 ATP5HP4-201ENST00000414313 475 ntBASIC8.8□□□□□ -1
SYCE2Q6PIF2 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC8.8□□□□□ -1
SYCE2Q6PIF2 EFCAB14P1-201ENST00000442409 463 ntBASIC8.8□□□□□ -1
SYCE2Q6PIF2 PHYKPL-205ENST00000476170 824 ntTSL 4 BASIC8.8□□□□□ -1
SYCE2Q6PIF2 PDPN-205ENST00000487038 607 ntTSL 2 BASIC8.8□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms