Protein–RNA interactions for Protein: Q9HCP0

CSNK1G1, Casein kinase I isoform gamma-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G1Q9HCP0 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CSNK1G1Q9HCP0 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.31■■□□□ 1
CSNK1G1Q9HCP0 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CSNK1G1Q9HCP0 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC21.31■■□□□ 1
CSNK1G1Q9HCP0 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
CSNK1G1Q9HCP0 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CSNK1G1Q9HCP0 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC21.31■■□□□ 1
CSNK1G1Q9HCP0 ADM-205ENST00000528544 586 ntTSL 2 BASIC21.31■■□□□ 1
CSNK1G1Q9HCP0 AC008403.3-201ENST00000598924 454 ntBASIC21.31■■□□□ 1
CSNK1G1Q9HCP0 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CSNK1G1Q9HCP0 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CSNK1G1Q9HCP0 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
CSNK1G1Q9HCP0 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CSNK1G1Q9HCP0 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
CSNK1G1Q9HCP0 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CSNK1G1Q9HCP0 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CSNK1G1Q9HCP0 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.31■■□□□ 1
CSNK1G1Q9HCP0 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.31■■□□□ 1
CSNK1G1Q9HCP0 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC21.3■■□□□ 1
CSNK1G1Q9HCP0 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21.3■■□□□ 1
CSNK1G1Q9HCP0 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.3■■□□□ 1
CSNK1G1Q9HCP0 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CSNK1G1Q9HCP0 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
CSNK1G1Q9HCP0 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC21.3■■□□□ 1
CSNK1G1Q9HCP0 MMAB-206ENST00000540016 945 ntTSL 3 BASIC21.3■■□□□ 1
CSNK1G1Q9HCP0 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC21.3■■□□□ 1
CSNK1G1Q9HCP0 AC005829.2-201ENST00000571422 1056 ntBASIC21.3■■□□□ 1
CSNK1G1Q9HCP0 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC21.3■■□□□ 1
CSNK1G1Q9HCP0 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC21.3■■□□□ 1
CSNK1G1Q9HCP0 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
CSNK1G1Q9HCP0 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
CSNK1G1Q9HCP0 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC21.29■■□□□ 1
CSNK1G1Q9HCP0 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
CSNK1G1Q9HCP0 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CSNK1G1Q9HCP0 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CSNK1G1Q9HCP0 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC21.29■■□□□ 1
CSNK1G1Q9HCP0 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.29■■□□□ 1
CSNK1G1Q9HCP0 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CSNK1G1Q9HCP0 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CSNK1G1Q9HCP0 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CSNK1G1Q9HCP0 ESRRAP1-201ENST00000400596 1257 ntBASIC21.29■■□□□ 1
CSNK1G1Q9HCP0 AC026366.1-201ENST00000488803 879 ntBASIC21.29■■□□□ 1
CSNK1G1Q9HCP0 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC21.29■■□□□ 1
CSNK1G1Q9HCP0 UNC93B4-201ENST00000505679 747 ntBASIC21.29■■□□□ 1
CSNK1G1Q9HCP0 AC023632.3-201ENST00000521633 145 ntBASIC21.29■■□□□ 1
CSNK1G1Q9HCP0 REXO2-208ENST00000539754 791 ntTSL 2 BASIC21.29■■□□□ 1
CSNK1G1Q9HCP0 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC21.29■■□□□ 1
CSNK1G1Q9HCP0 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CSNK1G1Q9HCP0 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CSNK1G1Q9HCP0 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CSNK1G1Q9HCP0 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
CSNK1G1Q9HCP0 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC21.28■■□□□ 1
CSNK1G1Q9HCP0 CLDN5-201ENST00000403084 2357 ntBASIC21.28■■□□□ 1
CSNK1G1Q9HCP0 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CSNK1G1Q9HCP0 GGT1-206ENST00000404223 952 ntTSL 2 BASIC21.28■■□□□ 1
CSNK1G1Q9HCP0 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC21.28■■□□□ 1
CSNK1G1Q9HCP0 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CSNK1G1Q9HCP0 AP003097.1-201ENST00000530657 1135 ntBASIC21.28■■□□□ 1
CSNK1G1Q9HCP0 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CSNK1G1Q9HCP0 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CSNK1G1Q9HCP0 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.28■■□□□ 1
CSNK1G1Q9HCP0 PTBP1P-201ENST00000554374 1601 ntBASIC21.28■■□□□ 1
CSNK1G1Q9HCP0 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.28■■□□□ 1
CSNK1G1Q9HCP0 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
CSNK1G1Q9HCP0 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
CSNK1G1Q9HCP0 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
CSNK1G1Q9HCP0 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.28■■□□□ 1
CSNK1G1Q9HCP0 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.28■■□□□ 1
CSNK1G1Q9HCP0 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC21.27■■□□□ 1
CSNK1G1Q9HCP0 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.27■■□□□ 1
CSNK1G1Q9HCP0 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.27■■□□□ 1
CSNK1G1Q9HCP0 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC21.27■■□□□ 1
CSNK1G1Q9HCP0 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CSNK1G1Q9HCP0 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC21.27■■□□□ 1
CSNK1G1Q9HCP0 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC21.27■■□□□ 1
CSNK1G1Q9HCP0 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CSNK1G1Q9HCP0 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC21.27■■□□□ 1
CSNK1G1Q9HCP0 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
CSNK1G1Q9HCP0 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CSNK1G1Q9HCP0 FAM201B-201ENST00000458407 597 ntBASIC21.27■■□□□ 1
CSNK1G1Q9HCP0 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
CSNK1G1Q9HCP0 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC21.27■■□□□ 1
CSNK1G1Q9HCP0 OR2A1-AS1-207ENST00000486094 819 ntBASIC21.27■■□□□ 1
CSNK1G1Q9HCP0 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC21.27■■□□□ 1
CSNK1G1Q9HCP0 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC21.27■■□□□ 1
CSNK1G1Q9HCP0 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC21.27■■□□□ 1
CSNK1G1Q9HCP0 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
CSNK1G1Q9HCP0 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.27■■□□□ 1
CSNK1G1Q9HCP0 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.27■■□□□ 1
CSNK1G1Q9HCP0 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.27■■□□□ 1
CSNK1G1Q9HCP0 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
CSNK1G1Q9HCP0 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CSNK1G1Q9HCP0 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC21.27■■□□□ 1
CSNK1G1Q9HCP0 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
CSNK1G1Q9HCP0 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.27■□□□□ 0.99
CSNK1G1Q9HCP0 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CSNK1G1Q9HCP0 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC21.26■□□□□ 0.99
CSNK1G1Q9HCP0 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CSNK1G1Q9HCP0 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.26■□□□□ 0.99
CSNK1G1Q9HCP0 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms