Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LRTM1Q9HBL6 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LRTM1Q9HBL6 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LRTM1Q9HBL6 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.52■□□□□ 0.72
LRTM1Q9HBL6 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
LRTM1Q9HBL6 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
LRTM1Q9HBL6 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.52■□□□□ 0.71
LRTM1Q9HBL6 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
LRTM1Q9HBL6 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
LRTM1Q9HBL6 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
LRTM1Q9HBL6 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
LRTM1Q9HBL6 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
LRTM1Q9HBL6 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.52■□□□□ 0.71
LRTM1Q9HBL6 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.51■□□□□ 0.71
LRTM1Q9HBL6 KRT8P36-201ENST00000489121 1440 ntBASIC19.51■□□□□ 0.71
LRTM1Q9HBL6 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.51■□□□□ 0.71
LRTM1Q9HBL6 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRTM1Q9HBL6 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LRTM1Q9HBL6 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRTM1Q9HBL6 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRTM1Q9HBL6 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRTM1Q9HBL6 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LRTM1Q9HBL6 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LRTM1Q9HBL6 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRTM1Q9HBL6 KRT18P61-201ENST00000585825 1298 ntBASIC19.51■□□□□ 0.71
LRTM1Q9HBL6 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.51■□□□□ 0.71
LRTM1Q9HBL6 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.51■□□□□ 0.71
LRTM1Q9HBL6 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LRTM1Q9HBL6 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.51■□□□□ 0.71
LRTM1Q9HBL6 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRTM1Q9HBL6 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LRTM1Q9HBL6 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.51■□□□□ 0.71
LRTM1Q9HBL6 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.51■□□□□ 0.71
LRTM1Q9HBL6 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRTM1Q9HBL6 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRTM1Q9HBL6 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRTM1Q9HBL6 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRTM1Q9HBL6 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRTM1Q9HBL6 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LRTM1Q9HBL6 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.5■□□□□ 0.71
LRTM1Q9HBL6 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRTM1Q9HBL6 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRTM1Q9HBL6 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.5■□□□□ 0.71
LRTM1Q9HBL6 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.5■□□□□ 0.71
LRTM1Q9HBL6 CDV3P1-201ENST00000471403 739 ntBASIC19.5■□□□□ 0.71
LRTM1Q9HBL6 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LRTM1Q9HBL6 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LRTM1Q9HBL6 UBE2DNL-204ENST00000602536 740 ntBASIC19.5■□□□□ 0.71
LRTM1Q9HBL6 TCF3P1-201ENST00000423021 1937 ntBASIC19.5■□□□□ 0.71
LRTM1Q9HBL6 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRTM1Q9HBL6 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LRTM1Q9HBL6 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRTM1Q9HBL6 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRTM1Q9HBL6 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRTM1Q9HBL6 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
LRTM1Q9HBL6 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.49■□□□□ 0.71
LRTM1Q9HBL6 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
LRTM1Q9HBL6 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRTM1Q9HBL6 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRTM1Q9HBL6 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
LRTM1Q9HBL6 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRTM1Q9HBL6 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.49■□□□□ 0.71
LRTM1Q9HBL6 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
LRTM1Q9HBL6 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.49■□□□□ 0.71
LRTM1Q9HBL6 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LRTM1Q9HBL6 FAM21FP-204ENST00000608637 956 ntBASIC19.49■□□□□ 0.71
LRTM1Q9HBL6 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
LRTM1Q9HBL6 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRTM1Q9HBL6 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.49■□□□□ 0.71
LRTM1Q9HBL6 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.49■□□□□ 0.71
LRTM1Q9HBL6 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRTM1Q9HBL6 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.49■□□□□ 0.71
LRTM1Q9HBL6 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRTM1Q9HBL6 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
LRTM1Q9HBL6 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRTM1Q9HBL6 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
LRTM1Q9HBL6 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRTM1Q9HBL6 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LRTM1Q9HBL6 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRTM1Q9HBL6 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
LRTM1Q9HBL6 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LRTM1Q9HBL6 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.48■□□□□ 0.71
LRTM1Q9HBL6 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRTM1Q9HBL6 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRTM1Q9HBL6 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRTM1Q9HBL6 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
LRTM1Q9HBL6 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRTM1Q9HBL6 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRTM1Q9HBL6 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRTM1Q9HBL6 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
LRTM1Q9HBL6 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRTM1Q9HBL6 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
LRTM1Q9HBL6 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LRTM1Q9HBL6 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
LRTM1Q9HBL6 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LRTM1Q9HBL6 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
LRTM1Q9HBL6 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.47■□□□□ 0.71
LRTM1Q9HBL6 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.47■□□□□ 0.71
LRTM1Q9HBL6 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.47■□□□□ 0.71
LRTM1Q9HBL6 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms