Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
SYNE2Q8WXH0 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
SYNE2Q8WXH0 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC8.35□□□□□ -1.07
SYNE2Q8WXH0 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC8.35□□□□□ -1.07
SYNE2Q8WXH0 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC8.35□□□□□ -1.07
SYNE2Q8WXH0 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
SYNE2Q8WXH0 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC8.35□□□□□ -1.07
SYNE2Q8WXH0 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
SYNE2Q8WXH0 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
SYNE2Q8WXH0 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC8.35□□□□□ -1.07
SYNE2Q8WXH0 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
SYNE2Q8WXH0 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
SYNE2Q8WXH0 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
SYNE2Q8WXH0 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
SYNE2Q8WXH0 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC8.35□□□□□ -1.07
SYNE2Q8WXH0 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC8.35□□□□□ -1.07
SYNE2Q8WXH0 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC8.35□□□□□ -1.07
SYNE2Q8WXH0 MIR6799-201ENST00000620297 69 ntBASIC8.35□□□□□ -1.07
SYNE2Q8WXH0 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
SYNE2Q8WXH0 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC8.35□□□□□ -1.07
SYNE2Q8WXH0 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
SYNE2Q8WXH0 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
SYNE2Q8WXH0 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC8.35□□□□□ -1.07
SYNE2Q8WXH0 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
SYNE2Q8WXH0 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
SYNE2Q8WXH0 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC8.35□□□□□ -1.07
SYNE2Q8WXH0 PARP8-206ENST00000503665 572 ntTSL 4 BASIC8.35□□□□□ -1.07
SYNE2Q8WXH0 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC8.35□□□□□ -1.07
SYNE2Q8WXH0 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC8.35□□□□□ -1.07
SYNE2Q8WXH0 AC106730.1-201ENST00000566722 1090 ntBASIC8.35□□□□□ -1.07
SYNE2Q8WXH0 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC8.35□□□□□ -1.07
SYNE2Q8WXH0 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC8.35□□□□□ -1.07
SYNE2Q8WXH0 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
SYNE2Q8WXH0 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
SYNE2Q8WXH0 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC8.35□□□□□ -1.07
SYNE2Q8WXH0 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
SYNE2Q8WXH0 AP005242.2-201ENST00000580065 1175 ntBASIC8.35□□□□□ -1.07
SYNE2Q8WXH0 AC011298.2-201ENST00000617989 482 ntBASIC8.35□□□□□ -1.07
SYNE2Q8WXH0 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
SYNE2Q8WXH0 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
SYNE2Q8WXH0 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
SYNE2Q8WXH0 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
SYNE2Q8WXH0 TSPY12P-201ENST00000421279 868 ntBASIC8.34□□□□□ -1.07
SYNE2Q8WXH0 CA15P1-201ENST00000481698 905 ntBASIC8.34□□□□□ -1.07
SYNE2Q8WXH0 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
SYNE2Q8WXH0 AL606495.2-201ENST00000605867 535 ntBASIC8.34□□□□□ -1.07
SYNE2Q8WXH0 DGCR10-201ENST00000609839 495 ntBASIC8.34□□□□□ -1.07
SYNE2Q8WXH0 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
SYNE2Q8WXH0 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
SYNE2Q8WXH0 AL353803.4-201ENST00000565882 1934 ntBASIC8.34□□□□□ -1.07
SYNE2Q8WXH0 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC8.34□□□□□ -1.07
SYNE2Q8WXH0 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC8.34□□□□□ -1.07
SYNE2Q8WXH0 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
SYNE2Q8WXH0 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
SYNE2Q8WXH0 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC8.34□□□□□ -1.07
SYNE2Q8WXH0 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC8.34□□□□□ -1.07
SYNE2Q8WXH0 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
SYNE2Q8WXH0 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
SYNE2Q8WXH0 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
SYNE2Q8WXH0 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
SYNE2Q8WXH0 CD70-202ENST00000423145 881 ntTSL 2 BASIC8.34□□□□□ -1.07
SYNE2Q8WXH0 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC8.34□□□□□ -1.07
SYNE2Q8WXH0 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC8.34□□□□□ -1.07
SYNE2Q8WXH0 AC011498.5-201ENST00000592027 486 ntBASIC8.34□□□□□ -1.07
SYNE2Q8WXH0 AC083906.6-201ENST00000641366 219 ntBASIC8.34□□□□□ -1.07
SYNE2Q8WXH0 AC116562.4-202ENST00000641738 218 ntBASIC8.34□□□□□ -1.07
SYNE2Q8WXH0 AC079781.4-201ENST00000641908 219 ntBASIC8.34□□□□□ -1.07
SYNE2Q8WXH0 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC8.34□□□□□ -1.07
SYNE2Q8WXH0 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
SYNE2Q8WXH0 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
SYNE2Q8WXH0 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
SYNE2Q8WXH0 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC8.34□□□□□ -1.07
SYNE2Q8WXH0 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC8.34□□□□□ -1.07
SYNE2Q8WXH0 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
SYNE2Q8WXH0 GALT-202ENST00000450095 1280 ntTSL 2 BASIC8.34□□□□□ -1.07
SYNE2Q8WXH0 AC022494.1-201ENST00000466044 728 ntBASIC8.34□□□□□ -1.07
SYNE2Q8WXH0 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC8.34□□□□□ -1.07
SYNE2Q8WXH0 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
SYNE2Q8WXH0 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
SYNE2Q8WXH0 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC8.34□□□□□ -1.07
SYNE2Q8WXH0 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC8.34□□□□□ -1.07
SYNE2Q8WXH0 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
SYNE2Q8WXH0 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
SYNE2Q8WXH0 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
SYNE2Q8WXH0 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
SYNE2Q8WXH0 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
SYNE2Q8WXH0 AC064862.7-201ENST00000604520 867 ntBASIC8.34□□□□□ -1.07
SYNE2Q8WXH0 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC8.33□□□□□ -1.08
SYNE2Q8WXH0 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
SYNE2Q8WXH0 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC8.33□□□□□ -1.08
SYNE2Q8WXH0 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
SYNE2Q8WXH0 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
SYNE2Q8WXH0 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
SYNE2Q8WXH0 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC8.33□□□□□ -1.08
SYNE2Q8WXH0 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
SYNE2Q8WXH0 METTL26-204ENST00000397665 558 ntTSL 2 BASIC8.33□□□□□ -1.08
SYNE2Q8WXH0 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
SYNE2Q8WXH0 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC8.33□□□□□ -1.08
SYNE2Q8WXH0 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC8.33□□□□□ -1.08
SYNE2Q8WXH0 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC8.33□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms