Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.64■□□□□ 0.57
PTCHD4Q6ZW05 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.64■□□□□ 0.57
PTCHD4Q6ZW05 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTCHD4Q6ZW05 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTCHD4Q6ZW05 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
PTCHD4Q6ZW05 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTCHD4Q6ZW05 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTCHD4Q6ZW05 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTCHD4Q6ZW05 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
PTCHD4Q6ZW05 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTCHD4Q6ZW05 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.63■□□□□ 0.57
PTCHD4Q6ZW05 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
PTCHD4Q6ZW05 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PTCHD4Q6ZW05 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.63■□□□□ 0.57
PTCHD4Q6ZW05 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.63■□□□□ 0.57
PTCHD4Q6ZW05 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.63■□□□□ 0.57
PTCHD4Q6ZW05 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC18.63■□□□□ 0.57
PTCHD4Q6ZW05 AC142381.2-201ENST00000566120 298 ntBASIC18.63■□□□□ 0.57
PTCHD4Q6ZW05 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.63■□□□□ 0.57
PTCHD4Q6ZW05 AC053503.5-201ENST00000601508 636 ntBASIC18.63■□□□□ 0.57
PTCHD4Q6ZW05 MIR6084-201ENST00000622012 110 ntBASIC18.63■□□□□ 0.57
PTCHD4Q6ZW05 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PTCHD4Q6ZW05 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
PTCHD4Q6ZW05 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
PTCHD4Q6ZW05 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.63■□□□□ 0.57
PTCHD4Q6ZW05 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PTCHD4Q6ZW05 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTCHD4Q6ZW05 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.62■□□□□ 0.57
PTCHD4Q6ZW05 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.62■□□□□ 0.57
PTCHD4Q6ZW05 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTCHD4Q6ZW05 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PTCHD4Q6ZW05 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PTCHD4Q6ZW05 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTCHD4Q6ZW05 RALB-208ENST00000631312 311 ntTSL 5 BASIC18.62■□□□□ 0.57
PTCHD4Q6ZW05 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PTCHD4Q6ZW05 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.62■□□□□ 0.57
PTCHD4Q6ZW05 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
PTCHD4Q6ZW05 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTCHD4Q6ZW05 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.62■□□□□ 0.57
PTCHD4Q6ZW05 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
PTCHD4Q6ZW05 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTCHD4Q6ZW05 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTCHD4Q6ZW05 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.62■□□□□ 0.57
PTCHD4Q6ZW05 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTCHD4Q6ZW05 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTCHD4Q6ZW05 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.61■□□□□ 0.57
PTCHD4Q6ZW05 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.61■□□□□ 0.57
PTCHD4Q6ZW05 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTCHD4Q6ZW05 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTCHD4Q6ZW05 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.61■□□□□ 0.57
PTCHD4Q6ZW05 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTCHD4Q6ZW05 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.61■□□□□ 0.57
PTCHD4Q6ZW05 AC061975.6-201ENST00000579045 1553 ntBASIC18.61■□□□□ 0.57
PTCHD4Q6ZW05 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTCHD4Q6ZW05 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
PTCHD4Q6ZW05 MTURN-203ENST00000409688 843 ntTSL 2 BASIC18.61■□□□□ 0.57
PTCHD4Q6ZW05 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC18.61■□□□□ 0.57
PTCHD4Q6ZW05 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.61■□□□□ 0.57
PTCHD4Q6ZW05 AL358852.1-201ENST00000623174 1268 ntBASIC18.61■□□□□ 0.57
PTCHD4Q6ZW05 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.61■□□□□ 0.57
PTCHD4Q6ZW05 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
PTCHD4Q6ZW05 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTCHD4Q6ZW05 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTCHD4Q6ZW05 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTCHD4Q6ZW05 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PTCHD4Q6ZW05 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PTCHD4Q6ZW05 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTCHD4Q6ZW05 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTCHD4Q6ZW05 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.6■□□□□ 0.57
PTCHD4Q6ZW05 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PTCHD4Q6ZW05 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.6■□□□□ 0.57
PTCHD4Q6ZW05 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
PTCHD4Q6ZW05 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTCHD4Q6ZW05 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTCHD4Q6ZW05 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTCHD4Q6ZW05 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PTCHD4Q6ZW05 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTCHD4Q6ZW05 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTCHD4Q6ZW05 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTCHD4Q6ZW05 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PTCHD4Q6ZW05 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.6■□□□□ 0.57
PTCHD4Q6ZW05 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PTCHD4Q6ZW05 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PTCHD4Q6ZW05 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC18.6■□□□□ 0.57
PTCHD4Q6ZW05 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTCHD4Q6ZW05 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PTCHD4Q6ZW05 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTCHD4Q6ZW05 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PTCHD4Q6ZW05 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTCHD4Q6ZW05 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
PTCHD4Q6ZW05 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.6■□□□□ 0.57
PTCHD4Q6ZW05 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTCHD4Q6ZW05 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTCHD4Q6ZW05 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PTCHD4Q6ZW05 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
PTCHD4Q6ZW05 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PTCHD4Q6ZW05 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.59■□□□□ 0.57
PTCHD4Q6ZW05 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.59■□□□□ 0.57
PTCHD4Q6ZW05 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTCHD4Q6ZW05 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms