Protein–RNA interactions for Protein: Q4G0I0

CCSMST1, Protein CCSMST1, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSMST1Q4G0I0 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCSMST1Q4G0I0 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCSMST1Q4G0I0 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCSMST1Q4G0I0 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CCSMST1Q4G0I0 AC020907.5-201ENST00000624372 1936 ntBASIC19.77■□□□□ 0.76
CCSMST1Q4G0I0 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCSMST1Q4G0I0 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCSMST1Q4G0I0 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.77■□□□□ 0.76
CCSMST1Q4G0I0 AC098934.4-201ENST00000564127 592 ntBASIC19.77■□□□□ 0.76
CCSMST1Q4G0I0 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.77■□□□□ 0.76
CCSMST1Q4G0I0 AC105020.6-201ENST00000621523 1217 ntBASIC19.77■□□□□ 0.76
CCSMST1Q4G0I0 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.77■□□□□ 0.76
CCSMST1Q4G0I0 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCSMST1Q4G0I0 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCSMST1Q4G0I0 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCSMST1Q4G0I0 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.76■□□□□ 0.75
CCSMST1Q4G0I0 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.76■□□□□ 0.75
CCSMST1Q4G0I0 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.76■□□□□ 0.75
CCSMST1Q4G0I0 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCSMST1Q4G0I0 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCSMST1Q4G0I0 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCSMST1Q4G0I0 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCSMST1Q4G0I0 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCSMST1Q4G0I0 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCSMST1Q4G0I0 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.76■□□□□ 0.75
CCSMST1Q4G0I0 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCSMST1Q4G0I0 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.76■□□□□ 0.75
CCSMST1Q4G0I0 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.76■□□□□ 0.75
CCSMST1Q4G0I0 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.76■□□□□ 0.75
CCSMST1Q4G0I0 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.76■□□□□ 0.75
CCSMST1Q4G0I0 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.76■□□□□ 0.75
CCSMST1Q4G0I0 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCSMST1Q4G0I0 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.76■□□□□ 0.75
CCSMST1Q4G0I0 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CCSMST1Q4G0I0 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CCSMST1Q4G0I0 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.76■□□□□ 0.75
CCSMST1Q4G0I0 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCSMST1Q4G0I0 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCSMST1Q4G0I0 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCSMST1Q4G0I0 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCSMST1Q4G0I0 AC092720.2-201ENST00000602388 1665 ntBASIC19.75■□□□□ 0.75
CCSMST1Q4G0I0 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
CCSMST1Q4G0I0 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCSMST1Q4G0I0 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.75■□□□□ 0.75
CCSMST1Q4G0I0 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCSMST1Q4G0I0 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCSMST1Q4G0I0 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CCSMST1Q4G0I0 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCSMST1Q4G0I0 SLC29A4P1-201ENST00000398760 971 ntBASIC19.75■□□□□ 0.75
CCSMST1Q4G0I0 PGM5P4-201ENST00000421970 445 ntBASIC19.75■□□□□ 0.75
CCSMST1Q4G0I0 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.75■□□□□ 0.75
CCSMST1Q4G0I0 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCSMST1Q4G0I0 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCSMST1Q4G0I0 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCSMST1Q4G0I0 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCSMST1Q4G0I0 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
CCSMST1Q4G0I0 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCSMST1Q4G0I0 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.74■□□□□ 0.75
CCSMST1Q4G0I0 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.74■□□□□ 0.75
CCSMST1Q4G0I0 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.74■□□□□ 0.75
CCSMST1Q4G0I0 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCSMST1Q4G0I0 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.74■□□□□ 0.75
CCSMST1Q4G0I0 GABARAPL3-202ENST00000624044 1851 ntBASIC19.74■□□□□ 0.75
CCSMST1Q4G0I0 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCSMST1Q4G0I0 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
CCSMST1Q4G0I0 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.74■□□□□ 0.75
CCSMST1Q4G0I0 LSM12P1-201ENST00000411836 588 ntBASIC19.74■□□□□ 0.75
CCSMST1Q4G0I0 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.74■□□□□ 0.75
CCSMST1Q4G0I0 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CCSMST1Q4G0I0 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CCSMST1Q4G0I0 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCSMST1Q4G0I0 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCSMST1Q4G0I0 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.74■□□□□ 0.75
CCSMST1Q4G0I0 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.74■□□□□ 0.75
CCSMST1Q4G0I0 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCSMST1Q4G0I0 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCSMST1Q4G0I0 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.73■□□□□ 0.75
CCSMST1Q4G0I0 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCSMST1Q4G0I0 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
CCSMST1Q4G0I0 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.73■□□□□ 0.75
CCSMST1Q4G0I0 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCSMST1Q4G0I0 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CCSMST1Q4G0I0 ID1-201ENST00000376105 1233 ntBASIC19.73■□□□□ 0.75
CCSMST1Q4G0I0 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.73■□□□□ 0.75
CCSMST1Q4G0I0 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.73■□□□□ 0.75
CCSMST1Q4G0I0 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.73■□□□□ 0.75
CCSMST1Q4G0I0 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCSMST1Q4G0I0 AL589743.5-201ENST00000616611 1050 ntBASIC19.73■□□□□ 0.75
CCSMST1Q4G0I0 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCSMST1Q4G0I0 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCSMST1Q4G0I0 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCSMST1Q4G0I0 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCSMST1Q4G0I0 AL512408.1-201ENST00000569378 2000 ntBASIC19.73■□□□□ 0.75
CCSMST1Q4G0I0 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.73■□□□□ 0.75
CCSMST1Q4G0I0 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCSMST1Q4G0I0 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCSMST1Q4G0I0 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCSMST1Q4G0I0 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CCSMST1Q4G0I0 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCSMST1Q4G0I0 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms