Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.38■□□□□ 0.69
GABREP78334 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.38■□□□□ 0.69
GABREP78334 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
GABREP78334 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
GABREP78334 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
GABREP78334 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GABREP78334 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
GABREP78334 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.38■□□□□ 0.69
GABREP78334 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
GABREP78334 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
GABREP78334 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GABREP78334 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
GABREP78334 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.37■□□□□ 0.69
GABREP78334 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.37■□□□□ 0.69
GABREP78334 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GABREP78334 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
GABREP78334 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GABREP78334 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
GABREP78334 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
GABREP78334 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
GABREP78334 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
GABREP78334 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
GABREP78334 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
GABREP78334 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.37■□□□□ 0.69
GABREP78334 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
GABREP78334 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
GABREP78334 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
GABREP78334 AC026471.5-201ENST00000615068 467 ntBASIC19.37■□□□□ 0.69
GABREP78334 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
GABREP78334 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
GABREP78334 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GABREP78334 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
GABREP78334 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
GABREP78334 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
GABREP78334 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GABREP78334 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
GABREP78334 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
GABREP78334 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
GABREP78334 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
GABREP78334 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.36■□□□□ 0.69
GABREP78334 TMPOP1-202ENST00000424642 1267 ntBASIC19.36■□□□□ 0.69
GABREP78334 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.36■□□□□ 0.69
GABREP78334 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GABREP78334 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
GABREP78334 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
GABREP78334 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.36■□□□□ 0.69
GABREP78334 CD177P1-201ENST00000606252 935 ntBASIC19.36■□□□□ 0.69
GABREP78334 AL356652.1-201ENST00000615962 565 ntBASIC19.36■□□□□ 0.69
GABREP78334 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
GABREP78334 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
GABREP78334 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.36■□□□□ 0.69
GABREP78334 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
GABREP78334 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GABREP78334 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
GABREP78334 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.35■□□□□ 0.69
GABREP78334 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
GABREP78334 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GABREP78334 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GABREP78334 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
GABREP78334 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GABREP78334 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
GABREP78334 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.35■□□□□ 0.69
GABREP78334 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
GABREP78334 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.35■□□□□ 0.69
GABREP78334 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.35■□□□□ 0.69
GABREP78334 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.35■□□□□ 0.69
GABREP78334 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
GABREP78334 AL445228.2-201ENST00000605589 952 ntBASIC19.35■□□□□ 0.69
GABREP78334 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GABREP78334 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.35■□□□□ 0.69
GABREP78334 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
GABREP78334 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
GABREP78334 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GABREP78334 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
GABREP78334 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GABREP78334 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
GABREP78334 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.34■□□□□ 0.69
GABREP78334 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
GABREP78334 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
GABREP78334 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
GABREP78334 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
GABREP78334 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.34■□□□□ 0.69
GABREP78334 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.34■□□□□ 0.69
GABREP78334 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
GABREP78334 AP003071.4-201ENST00000562276 1284 ntBASIC19.34■□□□□ 0.69
GABREP78334 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.34■□□□□ 0.69
GABREP78334 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
GABREP78334 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
GABREP78334 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
GABREP78334 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GABREP78334 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.34■□□□□ 0.69
GABREP78334 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GABREP78334 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GABREP78334 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
GABREP78334 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
GABREP78334 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
GABREP78334 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
GABREP78334 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
GABREP78334 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
GABREP78334 AL355355.2-201ENST00000442321 338 ntBASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms