Protein–RNA interactions for Protein: P54253

ATXN1, Ataxin-1, humanhuman

Known RBP Predictions only

Length 815 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1P54253 AC092667.1-201ENST00000434301 2586 ntBASIC21.32■■□□□ 1
ATXN1P54253 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.32■■□□□ 1
ATXN1P54253 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC21.32■■□□□ 1
ATXN1P54253 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.32■■□□□ 1
ATXN1P54253 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ATXN1P54253 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.32■■□□□ 1
ATXN1P54253 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
ATXN1P54253 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.32■■□□□ 1
ATXN1P54253 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.32■■□□□ 1
ATXN1P54253 AC073314.1-201ENST00000568729 2216 ntBASIC21.32■■□□□ 1
ATXN1P54253 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC21.32■■□□□ 1
ATXN1P54253 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ATXN1P54253 CYP21A1P-202ENST00000354927 1481 ntBASIC21.32■■□□□ 1
ATXN1P54253 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.32■■□□□ 1
ATXN1P54253 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
ATXN1P54253 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.31■■□□□ 1
ATXN1P54253 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
ATXN1P54253 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ATXN1P54253 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.31■■□□□ 1
ATXN1P54253 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
ATXN1P54253 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ATXN1P54253 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.31■■□□□ 1
ATXN1P54253 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC21.31■■□□□ 1
ATXN1P54253 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.31■■□□□ 1
ATXN1P54253 AL355472.2-201ENST00000422958 438 ntBASIC21.31■■□□□ 1
ATXN1P54253 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC21.31■■□□□ 1
ATXN1P54253 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC21.31■■□□□ 1
ATXN1P54253 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC21.31■■□□□ 1
ATXN1P54253 MIR2861-201ENST00000636310 90 ntBASIC21.31■■□□□ 1
ATXN1P54253 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
ATXN1P54253 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.31■■□□□ 1
ATXN1P54253 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
ATXN1P54253 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.31■■□□□ 1
ATXN1P54253 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.31■■□□□ 1
ATXN1P54253 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.31■■□□□ 1
ATXN1P54253 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.31■■□□□ 1
ATXN1P54253 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.3■■□□□ 1
ATXN1P54253 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ATXN1P54253 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC21.3■■□□□ 1
ATXN1P54253 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
ATXN1P54253 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.3■■□□□ 1
ATXN1P54253 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC21.3■■□□□ 1
ATXN1P54253 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.3■■□□□ 1
ATXN1P54253 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC21.3■■□□□ 1
ATXN1P54253 AC069236.1-201ENST00000604339 616 ntBASIC21.3■■□□□ 1
ATXN1P54253 AC006058.3-201ENST00000606217 1069 ntBASIC21.3■■□□□ 1
ATXN1P54253 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.3■■□□□ 1
ATXN1P54253 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.3■■□□□ 1
ATXN1P54253 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ATXN1P54253 FEM1AP1-201ENST00000431297 1995 ntBASIC21.3■■□□□ 1
ATXN1P54253 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
ATXN1P54253 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
ATXN1P54253 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ATXN1P54253 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
ATXN1P54253 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
ATXN1P54253 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.29■■□□□ 1
ATXN1P54253 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
ATXN1P54253 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ATXN1P54253 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.29■■□□□ 1
ATXN1P54253 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ATXN1P54253 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.29■■□□□ 1
ATXN1P54253 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
ATXN1P54253 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ATXN1P54253 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.29■■□□□ 1
ATXN1P54253 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ATXN1P54253 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.29■■□□□ 1
ATXN1P54253 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.29■■□□□ 1
ATXN1P54253 AC128676.1-201ENST00000454392 318 ntBASIC21.29■■□□□ 1
ATXN1P54253 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC21.29■■□□□ 1
ATXN1P54253 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC21.29■■□□□ 1
ATXN1P54253 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC21.29■■□□□ 1
ATXN1P54253 AC008694.1-202ENST00000636953 945 ntBASIC21.29■■□□□ 1
ATXN1P54253 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
ATXN1P54253 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.29■■□□□ 1
ATXN1P54253 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
ATXN1P54253 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ATXN1P54253 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
ATXN1P54253 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ATXN1P54253 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.28■■□□□ 1
ATXN1P54253 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ATXN1P54253 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
ATXN1P54253 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
ATXN1P54253 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.28■■□□□ 1
ATXN1P54253 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC21.28■■□□□ 1
ATXN1P54253 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC21.28■■□□□ 1
ATXN1P54253 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
ATXN1P54253 AC008550.1-201ENST00000511500 884 ntBASIC21.28■■□□□ 1
ATXN1P54253 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC21.28■■□□□ 1
ATXN1P54253 OR10C1-204ENST00000622521 1039 ntBASIC21.28■■□□□ 1
ATXN1P54253 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
ATXN1P54253 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
ATXN1P54253 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.28■■□□□ 1
ATXN1P54253 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC21.28■■□□□ 1
ATXN1P54253 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.28■■□□□ 1
ATXN1P54253 AC010980.2-201ENST00000587099 1412 ntBASIC21.28■■□□□ 1
ATXN1P54253 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
ATXN1P54253 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
ATXN1P54253 LINC01006-201ENST00000333319 2292 ntBASIC21.27■■□□□ 1
ATXN1P54253 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21.27■■□□□ 1
ATXN1P54253 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.27■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms