Protein–RNA interactions for Protein: P47017

LSM1, Sm-like protein LSm1, yeastyeast

Known RBP Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM1P47017 YGR242WYGR242W 309 nt0.74□□□□□ -2.29
LSM1P47017 snR34snR34 203 nt0.74□□□□□ -2.29
LSM1P47017 NOT5YPR072W 1683 nt0.74□□□□□ -2.29
LSM1P47017 BRO1YPL084W 2535 nt0.73□□□□□ -2.29
LSM1P47017 YCS4YLR272C 3531 nt0.73□□□□□ -2.29
LSM1P47017 RSM28YDR494W 1086 nt0.73□□□□□ -2.29
LSM1P47017 YGL217CYGL217C 342 nt0.73□□□□□ -2.29
LSM1P47017 YIR020CYIR020C 303 nt0.73□□□□□ -2.29
LSM1P47017 YNL235CYNL235C 432 nt0.73□□□□□ -2.29
LSM1P47017 GPX2YBR244W 489 nt0.73□□□□□ -2.29
LSM1P47017 CDC39YCR093W 6327 nt0.73□□□□□ -2.29
LSM1P47017 LST4YKL176C 2487 nt0.73□□□□□ -2.29
LSM1P47017 SLX4YLR135W 2247 nt0.72□□□□□ -2.29
LSM1P47017 LAG1YHL003C 1236 nt0.72□□□□□ -2.29
LSM1P47017 YAP3YHL009C 993 nt0.72□□□□□ -2.29
LSM1P47017 YLR031WYLR031W 561 nt0.72□□□□□ -2.29
LSM1P47017 YLR163W-AYLR163W-A 114 nt0.72□□□□□ -2.29
LSM1P47017 YNL179CYNL179C 438 nt0.72□□□□□ -2.29
LSM1P47017 IRC13YOR235W 315 nt0.72□□□□□ -2.29
LSM1P47017 RAD50YNL250W 3939 nt0.71□□□□□ -2.3
LSM1P47017 OSH6YKR003W 1347 nt0.71□□□□□ -2.3
LSM1P47017 YLL054CYLL054C 2532 nt0.71□□□□□ -2.3
LSM1P47017 YFR032C-BYFR032C-B 264 nt0.71□□□□□ -2.3
LSM1P47017 NGG1YDR176W 2109 nt0.7□□□□□ -2.3
LSM1P47017 YER121WYER121W 345 nt0.7□□□□□ -2.3
LSM1P47017 PRM8YGL053W 714 nt0.7□□□□□ -2.3
LSM1P47017 NBL1YHR199C-A 222 nt0.7□□□□□ -2.3
LSM1P47017 HYM1YKL189W 1200 nt0.7□□□□□ -2.3
LSM1P47017 CGI121YML036W 546 nt0.7□□□□□ -2.3
LSM1P47017 URA10YMR271C 684 nt0.7□□□□□ -2.3
LSM1P47017 SWS2YNL081C 432 nt0.7□□□□□ -2.3
LSM1P47017 YOL162WYOL162W 648 nt0.7□□□□□ -2.3
LSM1P47017 YPL034WYPL034W 498 nt0.7□□□□□ -2.3
LSM1P47017 VMA7YGR020C 357 nt0.69□□□□□ -2.3
LSM1P47017 RPS16AYMR143W 432 nt0.69□□□□□ -2.3
LSM1P47017 BRX1YOL077C 876 nt0.69□□□□□ -2.3
LSM1P47017 YOR169CYOR169C 465 nt0.69□□□□□ -2.3
LSM1P47017 YAR009CYAR009C 3591 nt0.68□□□□□ -2.3
LSM1P47017 GEP7YGL057C 864 nt0.68□□□□□ -2.3
LSM1P47017 YMR272W-AYMR272W-A 114 nt0.68□□□□□ -2.3
LSM1P47017 RTC6YPL183W-A 282 nt0.68□□□□□ -2.3
LSM1P47017 SGO1YOR073W 1773 nt0.68□□□□□ -2.3
LSM1P47017 YHL002C-AYHL002C-A 489 nt0.67□□□□□ -2.3
LSM1P47017 YBL029C-AYBL029C-A 285 nt0.67□□□□□ -2.3
LSM1P47017 YMR031W-AYMR031W-A 327 nt0.67□□□□□ -2.3
LSM1P47017 RPL9BYNL067W 576 nt0.67□□□□□ -2.3
LSM1P47017 RIO2YNL207W 1278 nt0.67□□□□□ -2.3
LSM1P47017 YOR105WYOR105W 327 nt0.67□□□□□ -2.3
LSM1P47017 FMP23YBR047W 528 nt0.67□□□□□ -2.3
LSM1P47017 ROX1YPR065W 1107 nt0.67□□□□□ -2.3
LSM1P47017 NUP145YGL092W 3954 nt0.67□□□□□ -2.3
LSM1P47017 AIM9YER080W 1884 nt0.67□□□□□ -2.3
LSM1P47017 APL3YBL037W 3078 nt0.66□□□□□ -2.3
LSM1P47017 YDR194W-AYDR194W-A 153 nt0.66□□□□□ -2.3
LSM1P47017 BTN2YGR142W 1233 nt0.66□□□□□ -2.3
LSM1P47017 YIR020C-BYIR020C-B 735 nt0.66□□□□□ -2.3
LSM1P47017 PEP8YJL053W 1140 nt0.66□□□□□ -2.3
LSM1P47017 PSF2YJL072C 642 nt0.66□□□□□ -2.3
LSM1P47017 YKL183C-AYKL183C-A 213 nt0.66□□□□□ -2.3
LSM1P47017 YPR159C-AYPR159C-A 102 nt0.66□□□□□ -2.3
LSM1P47017 YBR224WYBR224W 516 nt0.66□□□□□ -2.3
LSM1P47017 SPT21YMR179W 2277 nt0.66□□□□□ -2.3
LSM1P47017 PHO80YOL001W 882 nt0.65□□□□□ -2.31
LSM1P47017 SEC1YDR164C 2175 nt0.64□□□□□ -2.31
LSM1P47017 CDC24YAL041W 2565 nt0.64□□□□□ -2.31
LSM1P47017 PIP2YOR363C 2991 nt0.64□□□□□ -2.31
LSM1P47017 NHP2YDL208W 471 nt0.64□□□□□ -2.31
LSM1P47017 RAD6YGL058W 519 nt0.64□□□□□ -2.31
LSM1P47017 YGL204CYGL204C 306 nt0.64□□□□□ -2.31
LSM1P47017 THG1YGR024C 714 nt0.64□□□□□ -2.31
LSM1P47017 ATP15YPL271W 189 nt0.64□□□□□ -2.31
LSM1P47017 UTP13YLR222C 2454 nt0.64□□□□□ -2.31
LSM1P47017 BUD3YCL014W 4911 nt0.64□□□□□ -2.31
LSM1P47017 GDS1YOR355W 1569 nt0.63□□□□□ -2.31
LSM1P47017 SWT1YOR166C 1377 nt0.63□□□□□ -2.31
LSM1P47017 YLR366WYLR366W 306 nt0.63□□□□□ -2.31
LSM1P47017 ATG16YMR159C 453 nt0.63□□□□□ -2.31
LSM1P47017 IRC14YOR135C 342 nt0.63□□□□□ -2.31
LSM1P47017 YOR366WYOR366W 354 nt0.63□□□□□ -2.31
LSM1P47017 snR44snR44 211 nt0.63□□□□□ -2.31
LSM1P47017 YDR521WYDR521W 336 nt0.62□□□□□ -2.31
LSM1P47017 YGR265WYGR265W 411 nt0.62□□□□□ -2.31
LSM1P47017 RTT102YGR275W 474 nt0.62□□□□□ -2.31
LSM1P47017 HTD2YHR067W 843 nt0.62□□□□□ -2.31
LSM1P47017 BET4YJL031C 984 nt0.62□□□□□ -2.31
LSM1P47017 LCL2YLR104W 396 nt0.62□□□□□ -2.31
LSM1P47017 CMC4YMR194C-B 222 nt0.62□□□□□ -2.31
LSM1P47017 DIA1YMR316W 1011 nt0.62□□□□□ -2.31
LSM1P47017 NUP157YER105C 4176 nt0.62□□□□□ -2.31
LSM1P47017 PEP3YLR148W 2757 nt0.62□□□□□ -2.31
LSM1P47017 ANS1YHR126C 480 nt0.61□□□□□ -2.31
LSM1P47017 RCN1YKL159C 636 nt0.61□□□□□ -2.31
LSM1P47017 PAI3YMR174C 207 nt0.61□□□□□ -2.31
LSM1P47017 SLS1YLR139C 1932 nt0.61□□□□□ -2.31
LSM1P47017 KAR9YPL269W 1935 nt0.6□□□□□ -2.31
LSM1P47017 CYC7YEL039C 342 nt0.6□□□□□ -2.31
LSM1P47017 NTF2YER009W 378 nt0.6□□□□□ -2.31
LSM1P47017 RPL16AYIL133C 600 nt0.6□□□□□ -2.31
LSM1P47017 SHE4YOR035C 2370 nt0.6□□□□□ -2.31
LSM1P47017 NUP120YKL057C 3114 nt0.59□□□□□ -2.31
Retrieved 100 of 7,029 protein–RNA pairs in 116.6 ms