Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.75■□□□□ 0.59
UBL4AP11441 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.75■□□□□ 0.59
UBL4AP11441 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.75■□□□□ 0.59
UBL4AP11441 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
UBL4AP11441 AC231657.2-201ENST00000624556 255 ntBASIC18.75■□□□□ 0.59
UBL4AP11441 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.75■□□□□ 0.59
UBL4AP11441 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.75■□□□□ 0.59
UBL4AP11441 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.75■□□□□ 0.59
UBL4AP11441 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.75■□□□□ 0.59
UBL4AP11441 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBL4AP11441 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
UBL4AP11441 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.75■□□□□ 0.59
UBL4AP11441 AL157384.1-201ENST00000445995 2473 ntBASIC18.75■□□□□ 0.59
UBL4AP11441 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
UBL4AP11441 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBL4AP11441 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
UBL4AP11441 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
UBL4AP11441 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
UBL4AP11441 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.74■□□□□ 0.59
UBL4AP11441 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
UBL4AP11441 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
UBL4AP11441 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
UBL4AP11441 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
UBL4AP11441 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
UBL4AP11441 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
UBL4AP11441 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
UBL4AP11441 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
UBL4AP11441 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
UBL4AP11441 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.74■□□□□ 0.59
UBL4AP11441 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.74■□□□□ 0.59
UBL4AP11441 AL137784.2-201ENST00000607332 1000 ntBASIC18.74■□□□□ 0.59
UBL4AP11441 IKBKGP1-201ENST00000612193 1073 ntBASIC18.74■□□□□ 0.59
UBL4AP11441 AC092437.1-201ENST00000624794 1048 ntBASIC18.74■□□□□ 0.59
UBL4AP11441 MIR2861-201ENST00000636310 90 ntBASIC18.74■□□□□ 0.59
UBL4AP11441 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
UBL4AP11441 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
UBL4AP11441 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
UBL4AP11441 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
UBL4AP11441 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.74■□□□□ 0.59
UBL4AP11441 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
UBL4AP11441 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
UBL4AP11441 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
UBL4AP11441 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBL4AP11441 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.73■□□□□ 0.59
UBL4AP11441 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBL4AP11441 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBL4AP11441 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.73■□□□□ 0.59
UBL4AP11441 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBL4AP11441 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.73■□□□□ 0.59
UBL4AP11441 AC026471.1-201ENST00000564629 3026 ntBASIC18.73■□□□□ 0.59
UBL4AP11441 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.73■□□□□ 0.59
UBL4AP11441 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
UBL4AP11441 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBL4AP11441 AC007322.1-201ENST00000426983 750 ntBASIC18.73■□□□□ 0.59
UBL4AP11441 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.73■□□□□ 0.59
UBL4AP11441 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.73■□□□□ 0.59
UBL4AP11441 AC016405.3-201ENST00000607710 860 ntBASIC18.73■□□□□ 0.59
UBL4AP11441 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
UBL4AP11441 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.73■□□□□ 0.59
UBL4AP11441 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
UBL4AP11441 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
UBL4AP11441 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBL4AP11441 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBL4AP11441 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBL4AP11441 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
UBL4AP11441 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.73■□□□□ 0.59
UBL4AP11441 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBL4AP11441 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
UBL4AP11441 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBL4AP11441 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
UBL4AP11441 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBL4AP11441 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.72■□□□□ 0.59
UBL4AP11441 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBL4AP11441 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
UBL4AP11441 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.72■□□□□ 0.59
UBL4AP11441 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.72■□□□□ 0.59
UBL4AP11441 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
UBL4AP11441 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.72■□□□□ 0.59
UBL4AP11441 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
UBL4AP11441 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
UBL4AP11441 AC068338.2-201ENST00000563278 1430 ntBASIC18.72■□□□□ 0.59
UBL4AP11441 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBL4AP11441 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBL4AP11441 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
UBL4AP11441 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.72■□□□□ 0.59
UBL4AP11441 AP005212.1-201ENST00000581547 1997 ntBASIC18.72■□□□□ 0.59
UBL4AP11441 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBL4AP11441 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBL4AP11441 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.71■□□□□ 0.59
UBL4AP11441 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBL4AP11441 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.71■□□□□ 0.59
UBL4AP11441 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.71■□□□□ 0.59
UBL4AP11441 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.71■□□□□ 0.59
UBL4AP11441 AC004911.1-201ENST00000416316 871 ntBASIC18.71■□□□□ 0.59
UBL4AP11441 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.71■□□□□ 0.59
UBL4AP11441 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.71■□□□□ 0.59
UBL4AP11441 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.71■□□□□ 0.59
UBL4AP11441 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.71■□□□□ 0.59
UBL4AP11441 AC073314.1-201ENST00000568729 2216 ntBASIC18.71■□□□□ 0.59
UBL4AP11441 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms