Protein–RNA interactions for Protein: P0CX48

RPS11B, 40S ribosomal protein S11-B, yeastyeast

Known RBP Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPS11BP0CX48 YDL073WYDL073W 2955 nt0.37□□□□□ -2.35
RPS11BP0CX48 GIC2YDR309C 1152 nt0.36□□□□□ -2.35
RPS11BP0CX48 YER046W-AYER046W-A 330 nt0.36□□□□□ -2.35
RPS11BP0CX48 HIT1YJR055W 495 nt0.36□□□□□ -2.35
RPS11BP0CX48 RPL40BYKR094C 387 nt0.36□□□□□ -2.35
RPS11BP0CX48 PGA1YNL158W 597 nt0.36□□□□□ -2.35
RPS11BP0CX48 YPL135C-AYPL135C-A 174 nt0.36□□□□□ -2.35
RPS11BP0CX48 AIM9YER080W 1884 nt0.35□□□□□ -2.35
RPS11BP0CX48 SEC5YDR166C 2916 nt0.35□□□□□ -2.35
RPS11BP0CX48 YDR248CYDR248C 582 nt0.35□□□□□ -2.35
RPS11BP0CX48 MZM1YDR493W 372 nt0.35□□□□□ -2.35
RPS11BP0CX48 TMA20YER007C-A 546 nt0.35□□□□□ -2.35
RPS11BP0CX48 YGL217CYGL217C 342 nt0.35□□□□□ -2.35
RPS11BP0CX48 VMA7YGR020C 357 nt0.35□□□□□ -2.35
RPS11BP0CX48 GRX8YLR364W 330 nt0.35□□□□□ -2.35
RPS11BP0CX48 SWS2YNL081C 432 nt0.35□□□□□ -2.35
RPS11BP0CX48 ATX1YNL259C 222 nt0.35□□□□□ -2.35
RPS11BP0CX48 RRP15YPR143W 753 nt0.35□□□□□ -2.35
RPS11BP0CX48 UTP10YJL109C 5310 nt0.35□□□□□ -2.35
RPS11BP0CX48 PRP16YKR086W 3216 nt0.35□□□□□ -2.35
RPS11BP0CX48 ULP2YIL031W 3105 nt0.35□□□□□ -2.35
RPS11BP0CX48 NUR1YDL089W 1455 nt0.35□□□□□ -2.35
RPS11BP0CX48 SWT1YOR166C 1377 nt0.34□□□□□ -2.35
RPS11BP0CX48 SET3YKR029C 2256 nt0.34□□□□□ -2.35
RPS11BP0CX48 YFL012W-AYFL012W-A 375 nt0.34□□□□□ -2.36
RPS11BP0CX48 COG7YGL005C 840 nt0.34□□□□□ -2.36
RPS11BP0CX48 YJL032WYJL032W 315 nt0.34□□□□□ -2.36
RPS11BP0CX48 YJL127C-BYJL127C-B 159 nt0.34□□□□□ -2.36
RPS11BP0CX48 RPC25YKL144C 639 nt0.34□□□□□ -2.36
RPS11BP0CX48 ATP18YML081C-A 180 nt0.34□□□□□ -2.36
RPS11BP0CX48 RIO2YNL207W 1278 nt0.34□□□□□ -2.36
RPS11BP0CX48 YOR218CYOR218C 420 nt0.34□□□□□ -2.36
RPS11BP0CX48 SLX4YLR135W 2247 nt0.34□□□□□ -2.36
RPS11BP0CX48 UTP13YLR222C 2454 nt0.33□□□□□ -2.36
RPS11BP0CX48 YCR043CYCR043C 384 nt0.33□□□□□ -2.36
RPS11BP0CX48 tF(GAA)BtF(GAA)B 73 nt0.33□□□□□ -2.36
RPS11BP0CX48 tF(GAA)FtF(GAA)F 73 nt0.33□□□□□ -2.36
RPS11BP0CX48 tF(GAA)GtF(GAA)G 73 nt0.33□□□□□ -2.36
RPS11BP0CX48 tF(GAA)H1tF(GAA)H1 73 nt0.33□□□□□ -2.36
RPS11BP0CX48 tF(GAA)H2tF(GAA)H2 73 nt0.33□□□□□ -2.36
RPS11BP0CX48 tF(GAA)MtF(GAA)M 73 nt0.33□□□□□ -2.36
RPS11BP0CX48 tF(GAA)P1tF(GAA)P1 73 nt0.33□□□□□ -2.36
RPS11BP0CX48 tF(GAA)P2tF(GAA)P2 73 nt0.33□□□□□ -2.36
RPS11BP0CX48 SEC22YLR268W 645 nt0.33□□□□□ -2.36
RPS11BP0CX48 RPL38YLR325C 237 nt0.33□□□□□ -2.36
RPS11BP0CX48 YLR458WYLR458W 381 nt0.33□□□□□ -2.36
RPS11BP0CX48 FAR3YMR052W 615 nt0.33□□□□□ -2.36
RPS11BP0CX48 YMR178WYMR178W 825 nt0.33□□□□□ -2.36
RPS11BP0CX48 YBR032WYBR032W 303 nt0.33□□□□□ -2.36
RPS11BP0CX48 RKR1YMR247C 4689 nt0.32□□□□□ -2.36
RPS11BP0CX48 GDS1YOR355W 1569 nt0.32□□□□□ -2.36
RPS11BP0CX48 PRM8YGL053W 714 nt0.32□□□□□ -2.36
RPS11BP0CX48 GOS1YHL031C 672 nt0.32□□□□□ -2.36
RPS11BP0CX48 COX6YHR051W 447 nt0.32□□□□□ -2.36
RPS11BP0CX48 YBL083CYBL083C 426 nt0.32□□□□□ -2.36
RPS11BP0CX48 SPP381YBR152W 876 nt0.32□□□□□ -2.36
RPS11BP0CX48 ERV15YBR210W 429 nt0.32□□□□□ -2.36
RPS11BP0CX48 RSM28YDR494W 1086 nt0.31□□□□□ -2.36
RPS11BP0CX48 YEL018C-AYEL018C-A 534 nt0.31□□□□□ -2.36
RPS11BP0CX48 SMB1YER029C 591 nt0.31□□□□□ -2.36
RPS11BP0CX48 LAG1YHL003C 1236 nt0.31□□□□□ -2.36
RPS11BP0CX48 NEJ1YLR265C 1029 nt0.31□□□□□ -2.36
RPS11BP0CX48 GPI2YPL076W 843 nt0.31□□□□□ -2.36
RPS11BP0CX48 YDR290WYDR290W 330 nt0.3□□□□□ -2.36
RPS11BP0CX48 CYC7YEL039C 342 nt0.3□□□□□ -2.36
RPS11BP0CX48 YKL145W-AYKL145W-A 93 nt0.3□□□□□ -2.36
RPS11BP0CX48 YOL085W-AYOL085W-A 213 nt0.3□□□□□ -2.36
RPS11BP0CX48 IRC14YOR135C 342 nt0.3□□□□□ -2.36
RPS11BP0CX48 LDH1YBR204C 1128 nt0.3□□□□□ -2.36
RPS11BP0CX48 OSH6YKR003W 1347 nt0.3□□□□□ -2.36
RPS11BP0CX48 YLL054CYLL054C 2532 nt0.3□□□□□ -2.36
RPS11BP0CX48 YBP2YGL060W 1926 nt0.29□□□□□ -2.36
RPS11BP0CX48 SPT21YMR179W 2277 nt0.29□□□□□ -2.36
RPS11BP0CX48 ABM1YJR108W 372 nt0.29□□□□□ -2.36
RPS11BP0CX48 RCN1YKL159C 636 nt0.29□□□□□ -2.36
RPS11BP0CX48 BRX1YOL077C 876 nt0.29□□□□□ -2.36
RPS11BP0CX48 YPR142CYPR142C 564 nt0.29□□□□□ -2.36
RPS11BP0CX48 LYS14YDR034C 2373 nt0.29□□□□□ -2.36
RPS11BP0CX48 FMP27YLR454W 7887 nt0.29□□□□□ -2.36
RPS11BP0CX48 SGO1YOR073W 1773 nt0.29□□□□□ -2.36
RPS11BP0CX48 LST4YKL176C 2487 nt0.28□□□□□ -2.36
RPS11BP0CX48 YCR016WYCR016W 873 nt0.28□□□□□ -2.36
RPS11BP0CX48 HYM1YKL189W 1200 nt0.28□□□□□ -2.36
RPS11BP0CX48 RPL9BYNL067W 576 nt0.28□□□□□ -2.36
RPS11BP0CX48 SFG1YOR315W 1041 nt0.28□□□□□ -2.36
RPS11BP0CX48 NOT5YPR072W 1683 nt0.27□□□□□ -2.37
RPS11BP0CX48 GEA2YEL022W 4380 nt0.27□□□□□ -2.37
RPS11BP0CX48 SLD5YDR489W 885 nt0.27□□□□□ -2.37
RPS11BP0CX48 YIL030W-AYIL030W-A 339 nt0.27□□□□□ -2.37
RPS11BP0CX48 YOL024WYOL024W 519 nt0.27□□□□□ -2.37
RPS11BP0CX48 YOL150CYOL150C 312 nt0.27□□□□□ -2.37
RPS11BP0CX48 YLL007CYLL007C 1998 nt0.26□□□□□ -2.37
RPS11BP0CX48 AI1Q0050 2505 nt0.26□□□□□ -2.37
RPS11BP0CX48 MXR1YER042W 555 nt0.26□□□□□ -2.37
RPS11BP0CX48 IZH4YOL101C 939 nt0.26□□□□□ -2.37
RPS11BP0CX48 FMP23YBR047W 528 nt0.26□□□□□ -2.37
RPS11BP0CX48 RIM20YOR275C 1986 nt0.25□□□□□ -2.37
RPS11BP0CX48 NDD1YOR372C 1665 nt0.25□□□□□ -2.37
RPS11BP0CX48 YCK3YER123W 1575 nt0.25□□□□□ -2.37
RPS11BP0CX48 YIL059CYIL059C 366 nt0.25□□□□□ -2.37
Retrieved 100 of 7,029 protein–RNA pairs in 14.8 ms