Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CAPN1P07384 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.96■□□□□ 0.79
CAPN1P07384 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
CAPN1P07384 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CAPN1P07384 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CAPN1P07384 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CAPN1P07384 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CAPN1P07384 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CAPN1P07384 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.95■□□□□ 0.78
CAPN1P07384 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
CAPN1P07384 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
CAPN1P07384 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.95■□□□□ 0.78
CAPN1P07384 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.95■□□□□ 0.78
CAPN1P07384 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
CAPN1P07384 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CAPN1P07384 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
CAPN1P07384 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CAPN1P07384 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.95■□□□□ 0.78
CAPN1P07384 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
CAPN1P07384 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CAPN1P07384 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CAPN1P07384 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CAPN1P07384 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CAPN1P07384 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
CAPN1P07384 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
CAPN1P07384 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.94■□□□□ 0.78
CAPN1P07384 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CAPN1P07384 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.94■□□□□ 0.78
CAPN1P07384 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CAPN1P07384 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
CAPN1P07384 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CAPN1P07384 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CAPN1P07384 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.94■□□□□ 0.78
CAPN1P07384 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CAPN1P07384 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CAPN1P07384 TERF1P5-201ENST00000477545 1207 ntBASIC19.94■□□□□ 0.78
CAPN1P07384 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.94■□□□□ 0.78
CAPN1P07384 AC120498.10-201ENST00000621827 505 ntBASIC19.94■□□□□ 0.78
CAPN1P07384 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.94■□□□□ 0.78
CAPN1P07384 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CAPN1P07384 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.94■□□□□ 0.78
CAPN1P07384 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CAPN1P07384 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CAPN1P07384 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CAPN1P07384 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.94■□□□□ 0.78
CAPN1P07384 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.94■□□□□ 0.78
CAPN1P07384 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.93■□□□□ 0.78
CAPN1P07384 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CAPN1P07384 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CAPN1P07384 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CAPN1P07384 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CAPN1P07384 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CAPN1P07384 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CAPN1P07384 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CAPN1P07384 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CAPN1P07384 AC245052.3-201ENST00000450182 901 ntBASIC19.93■□□□□ 0.78
CAPN1P07384 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.93■□□□□ 0.78
CAPN1P07384 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CAPN1P07384 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CAPN1P07384 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.93■□□□□ 0.78
CAPN1P07384 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CAPN1P07384 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CAPN1P07384 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CAPN1P07384 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CAPN1P07384 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CAPN1P07384 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CAPN1P07384 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.93■□□□□ 0.78
CAPN1P07384 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CAPN1P07384 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CAPN1P07384 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
CAPN1P07384 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CAPN1P07384 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CAPN1P07384 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CAPN1P07384 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CAPN1P07384 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.92■□□□□ 0.78
CAPN1P07384 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.92■□□□□ 0.78
CAPN1P07384 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.92■□□□□ 0.78
CAPN1P07384 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
CAPN1P07384 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CAPN1P07384 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.92■□□□□ 0.78
CAPN1P07384 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CAPN1P07384 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
CAPN1P07384 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
CAPN1P07384 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.92■□□□□ 0.78
CAPN1P07384 AC133552.2-202ENST00000575694 574 ntBASIC19.92■□□□□ 0.78
CAPN1P07384 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.92■□□□□ 0.78
CAPN1P07384 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.92■□□□□ 0.78
CAPN1P07384 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CAPN1P07384 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.92■□□□□ 0.78
CAPN1P07384 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CAPN1P07384 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CAPN1P07384 AL391422.3-201ENST00000603791 2761 ntBASIC19.92■□□□□ 0.78
CAPN1P07384 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CAPN1P07384 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CAPN1P07384 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.92■□□□□ 0.78
CAPN1P07384 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.92■□□□□ 0.78
CAPN1P07384 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.91■□□□□ 0.78
CAPN1P07384 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CAPN1P07384 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.91■□□□□ 0.78
CAPN1P07384 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms