Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
KRT6AP02538 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.66■□□□□ 0.74
KRT6AP02538 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
KRT6AP02538 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.66■□□□□ 0.74
KRT6AP02538 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.66■□□□□ 0.74
KRT6AP02538 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.66■□□□□ 0.74
KRT6AP02538 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.66■□□□□ 0.74
KRT6AP02538 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
KRT6AP02538 KRT18P61-201ENST00000585825 1298 ntBASIC19.66■□□□□ 0.74
KRT6AP02538 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.66■□□□□ 0.74
KRT6AP02538 FAM21FP-204ENST00000608637 956 ntBASIC19.66■□□□□ 0.74
KRT6AP02538 MYCNOS-205ENST00000641950 531 ntBASIC19.66■□□□□ 0.74
KRT6AP02538 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
KRT6AP02538 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
KRT6AP02538 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
KRT6AP02538 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
KRT6AP02538 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
KRT6AP02538 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
KRT6AP02538 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
KRT6AP02538 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
KRT6AP02538 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
KRT6AP02538 AC034268.1-201ENST00000441047 882 ntBASIC19.65■□□□□ 0.74
KRT6AP02538 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.65■□□□□ 0.74
KRT6AP02538 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
KRT6AP02538 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
KRT6AP02538 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
KRT6AP02538 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
KRT6AP02538 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
KRT6AP02538 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
KRT6AP02538 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.65■□□□□ 0.74
KRT6AP02538 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
KRT6AP02538 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
KRT6AP02538 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.64■□□□□ 0.74
KRT6AP02538 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
KRT6AP02538 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.64■□□□□ 0.73
KRT6AP02538 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.64■□□□□ 0.73
KRT6AP02538 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
KRT6AP02538 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.64■□□□□ 0.73
KRT6AP02538 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
KRT6AP02538 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.64■□□□□ 0.73
KRT6AP02538 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
KRT6AP02538 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.64■□□□□ 0.73
KRT6AP02538 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
KRT6AP02538 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.64■□□□□ 0.73
KRT6AP02538 NTF6G-201ENST00000591094 616 ntBASIC19.64■□□□□ 0.73
KRT6AP02538 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
KRT6AP02538 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
KRT6AP02538 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
KRT6AP02538 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
KRT6AP02538 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.73
KRT6AP02538 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
KRT6AP02538 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
KRT6AP02538 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
KRT6AP02538 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.64■□□□□ 0.73
KRT6AP02538 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
KRT6AP02538 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
KRT6AP02538 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
KRT6AP02538 AL391422.3-201ENST00000603791 2761 ntBASIC19.64■□□□□ 0.73
KRT6AP02538 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
KRT6AP02538 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KRT6AP02538 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.63■□□□□ 0.73
KRT6AP02538 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KRT6AP02538 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
KRT6AP02538 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KRT6AP02538 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KRT6AP02538 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KRT6AP02538 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
KRT6AP02538 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.63■□□□□ 0.73
KRT6AP02538 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
KRT6AP02538 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KRT6AP02538 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
KRT6AP02538 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.63■□□□□ 0.73
KRT6AP02538 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
KRT6AP02538 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.63■□□□□ 0.73
KRT6AP02538 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
KRT6AP02538 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
KRT6AP02538 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
KRT6AP02538 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KRT6AP02538 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KRT6AP02538 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
KRT6AP02538 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KRT6AP02538 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.63■□□□□ 0.73
KRT6AP02538 AC099778.1-201ENST00000568593 1911 ntBASIC19.63■□□□□ 0.73
KRT6AP02538 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.62■□□□□ 0.73
KRT6AP02538 AIRN-201ENST00000601203 4374 ntBASIC19.62■□□□□ 0.73
KRT6AP02538 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
KRT6AP02538 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KRT6AP02538 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
KRT6AP02538 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
KRT6AP02538 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KRT6AP02538 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.62■□□□□ 0.73
KRT6AP02538 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
KRT6AP02538 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KRT6AP02538 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
KRT6AP02538 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
KRT6AP02538 AC097381.1-201ENST00000429019 1296 ntBASIC19.62■□□□□ 0.73
KRT6AP02538 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.62■□□□□ 0.73
KRT6AP02538 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KRT6AP02538 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.62■□□□□ 0.73
KRT6AP02538 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms