Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
SIX3O95343 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SIX3O95343 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SIX3O95343 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
SIX3O95343 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.85■□□□□ 0.77
SIX3O95343 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
SIX3O95343 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.85■□□□□ 0.77
SIX3O95343 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.84■□□□□ 0.77
SIX3O95343 TCF3P1-201ENST00000423021 1937 ntBASIC19.84■□□□□ 0.77
SIX3O95343 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SIX3O95343 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.84■□□□□ 0.77
SIX3O95343 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SIX3O95343 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.84■□□□□ 0.77
SIX3O95343 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
SIX3O95343 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SIX3O95343 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SIX3O95343 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.84■□□□□ 0.77
SIX3O95343 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SIX3O95343 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SIX3O95343 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.84■□□□□ 0.77
SIX3O95343 NTF6G-201ENST00000591094 616 ntBASIC19.84■□□□□ 0.77
SIX3O95343 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.84■□□□□ 0.77
SIX3O95343 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SIX3O95343 KRT8P36-201ENST00000489121 1440 ntBASIC19.84■□□□□ 0.77
SIX3O95343 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
SIX3O95343 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
SIX3O95343 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
SIX3O95343 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.83■□□□□ 0.77
SIX3O95343 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SIX3O95343 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SIX3O95343 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SIX3O95343 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SIX3O95343 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SIX3O95343 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.83■□□□□ 0.77
SIX3O95343 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SIX3O95343 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.83■□□□□ 0.77
SIX3O95343 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
SIX3O95343 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SIX3O95343 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SIX3O95343 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.83■□□□□ 0.76
SIX3O95343 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.83■□□□□ 0.76
SIX3O95343 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SIX3O95343 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SIX3O95343 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
SIX3O95343 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SIX3O95343 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SIX3O95343 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SIX3O95343 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SIX3O95343 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
SIX3O95343 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SIX3O95343 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
SIX3O95343 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
SIX3O95343 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SIX3O95343 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
SIX3O95343 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SIX3O95343 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.82■□□□□ 0.76
SIX3O95343 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SIX3O95343 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.82■□□□□ 0.76
SIX3O95343 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SIX3O95343 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SIX3O95343 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.81■□□□□ 0.76
SIX3O95343 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SIX3O95343 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SIX3O95343 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
SIX3O95343 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.81■□□□□ 0.76
SIX3O95343 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
SIX3O95343 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SIX3O95343 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.81■□□□□ 0.76
SIX3O95343 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.81■□□□□ 0.76
SIX3O95343 AC097381.1-201ENST00000429019 1296 ntBASIC19.81■□□□□ 0.76
SIX3O95343 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.81■□□□□ 0.76
SIX3O95343 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SIX3O95343 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.81■□□□□ 0.76
SIX3O95343 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.81■□□□□ 0.76
SIX3O95343 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.81■□□□□ 0.76
SIX3O95343 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
SIX3O95343 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.81■□□□□ 0.76
SIX3O95343 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.81■□□□□ 0.76
SIX3O95343 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SIX3O95343 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SIX3O95343 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SIX3O95343 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.81■□□□□ 0.76
SIX3O95343 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SIX3O95343 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SIX3O95343 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SIX3O95343 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SIX3O95343 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
SIX3O95343 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SIX3O95343 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.8■□□□□ 0.76
SIX3O95343 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.8■□□□□ 0.76
SIX3O95343 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SIX3O95343 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.8■□□□□ 0.76
SIX3O95343 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.8■□□□□ 0.76
SIX3O95343 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SIX3O95343 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SIX3O95343 AC034268.1-201ENST00000441047 882 ntBASIC19.8■□□□□ 0.76
SIX3O95343 CDV3P1-201ENST00000471403 739 ntBASIC19.8■□□□□ 0.76
SIX3O95343 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.8■□□□□ 0.76
SIX3O95343 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.8■□□□□ 0.76
SIX3O95343 AC087623.3-201ENST00000607047 1098 ntBASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms