Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCDC66A2RUB6 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCDC66A2RUB6 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.89■■□□□ 1.09
CCDC66A2RUB6 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCDC66A2RUB6 AC121338.2-201ENST00000622535 1744 ntBASIC21.89■■□□□ 1.09
CCDC66A2RUB6 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCDC66A2RUB6 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCDC66A2RUB6 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.88■■□□□ 1.09
CCDC66A2RUB6 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
CCDC66A2RUB6 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC21.88■■□□□ 1.09
CCDC66A2RUB6 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.88■■□□□ 1.09
CCDC66A2RUB6 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
CCDC66A2RUB6 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CCDC66A2RUB6 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.88■■□□□ 1.09
CCDC66A2RUB6 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
CCDC66A2RUB6 EDA-201ENST00000338901 1233 ntBASIC21.88■■□□□ 1.09
CCDC66A2RUB6 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCDC66A2RUB6 AC096631.2-201ENST00000436136 790 ntBASIC21.88■■□□□ 1.09
CCDC66A2RUB6 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.88■■□□□ 1.09
CCDC66A2RUB6 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCDC66A2RUB6 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.88■■□□□ 1.09
CCDC66A2RUB6 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CCDC66A2RUB6 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCDC66A2RUB6 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
CCDC66A2RUB6 GABARAPL3-202ENST00000624044 1851 ntBASIC21.88■■□□□ 1.09
CCDC66A2RUB6 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCDC66A2RUB6 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.88■■□□□ 1.09
CCDC66A2RUB6 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CCDC66A2RUB6 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC21.87■■□□□ 1.09
CCDC66A2RUB6 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.87■■□□□ 1.09
CCDC66A2RUB6 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC21.87■■□□□ 1.09
CCDC66A2RUB6 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCDC66A2RUB6 MIR572-201ENST00000384983 95 ntBASIC21.87■■□□□ 1.09
CCDC66A2RUB6 AP001330.3-201ENST00000520123 633 ntBASIC21.87■■□□□ 1.09
CCDC66A2RUB6 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.87■■□□□ 1.09
CCDC66A2RUB6 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.87■■□□□ 1.09
CCDC66A2RUB6 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CCDC66A2RUB6 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.87■■□□□ 1.09
CCDC66A2RUB6 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCDC66A2RUB6 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCDC66A2RUB6 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCDC66A2RUB6 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCDC66A2RUB6 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCDC66A2RUB6 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCDC66A2RUB6 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCDC66A2RUB6 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCDC66A2RUB6 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
CCDC66A2RUB6 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCDC66A2RUB6 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
CCDC66A2RUB6 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCDC66A2RUB6 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.86■■□□□ 1.09
CCDC66A2RUB6 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCDC66A2RUB6 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCDC66A2RUB6 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC21.86■■□□□ 1.09
CCDC66A2RUB6 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.86■■□□□ 1.09
CCDC66A2RUB6 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.86■■□□□ 1.09
CCDC66A2RUB6 AC120498.9-201ENST00000339021 3867 ntBASIC21.86■■□□□ 1.09
CCDC66A2RUB6 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CCDC66A2RUB6 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
CCDC66A2RUB6 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCDC66A2RUB6 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCDC66A2RUB6 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CCDC66A2RUB6 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC21.86■■□□□ 1.09
CCDC66A2RUB6 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC66A2RUB6 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC66A2RUB6 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC66A2RUB6 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC21.85■■□□□ 1.09
CCDC66A2RUB6 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC66A2RUB6 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC66A2RUB6 AP005212.1-201ENST00000581547 1997 ntBASIC21.85■■□□□ 1.09
CCDC66A2RUB6 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC66A2RUB6 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC21.85■■□□□ 1.09
CCDC66A2RUB6 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC66A2RUB6 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC66A2RUB6 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC66A2RUB6 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC66A2RUB6 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
CCDC66A2RUB6 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC66A2RUB6 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
CCDC66A2RUB6 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.85■■□□□ 1.09
CCDC66A2RUB6 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC21.85■■□□□ 1.09
CCDC66A2RUB6 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC66A2RUB6 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC66A2RUB6 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC21.85■■□□□ 1.09
CCDC66A2RUB6 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC66A2RUB6 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC66A2RUB6 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
CCDC66A2RUB6 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC66A2RUB6 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC66A2RUB6 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.84■■□□□ 1.09
CCDC66A2RUB6 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
CCDC66A2RUB6 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.84■■□□□ 1.09
CCDC66A2RUB6 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC66A2RUB6 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.84■■□□□ 1.09
CCDC66A2RUB6 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.84■■□□□ 1.09
CCDC66A2RUB6 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.84■■□□□ 1.09
CCDC66A2RUB6 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
CCDC66A2RUB6 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
CCDC66A2RUB6 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC66A2RUB6 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms