Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav8-1A0A075B641 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav8-1A0A075B641 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav8-1A0A075B641 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav8-1A0A075B641 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC12.71□□□□□ -0.37
Trav8-1A0A075B641 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav8-1A0A075B641 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav8-1A0A075B641 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav8-1A0A075B641 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC12.71□□□□□ -0.37
Trav8-1A0A075B641 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC12.71□□□□□ -0.37
Trav8-1A0A075B641 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav8-1A0A075B641 Serp2-204ENSMUST00000228055 705 ntBASIC12.71□□□□□ -0.37
Trav8-1A0A075B641 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav8-1A0A075B641 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav8-1A0A075B641 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav8-1A0A075B641 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.38
Trav8-1A0A075B641 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav8-1A0A075B641 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Trav8-1A0A075B641 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav8-1A0A075B641 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav8-1A0A075B641 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav8-1A0A075B641 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Trav8-1A0A075B641 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav8-1A0A075B641 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav8-1A0A075B641 Gm43672-201ENSMUST00000199072 1731 ntBASIC12.71□□□□□ -0.38
Trav8-1A0A075B641 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC12.71□□□□□ -0.38
Trav8-1A0A075B641 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav8-1A0A075B641 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav8-1A0A075B641 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav8-1A0A075B641 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav8-1A0A075B641 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav8-1A0A075B641 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Trav8-1A0A075B641 Gm45774-201ENSMUST00000211992 2665 ntBASIC12.7□□□□□ -0.38
Trav8-1A0A075B641 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trav8-1A0A075B641 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav8-1A0A075B641 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav8-1A0A075B641 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav8-1A0A075B641 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav8-1A0A075B641 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC12.7□□□□□ -0.38
Trav8-1A0A075B641 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav8-1A0A075B641 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Trav8-1A0A075B641 Gm43759-201ENSMUST00000196925 1261 ntBASIC12.7□□□□□ -0.38
Trav8-1A0A075B641 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trav8-1A0A075B641 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav8-1A0A075B641 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav8-1A0A075B641 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav8-1A0A075B641 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav8-1A0A075B641 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav8-1A0A075B641 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav8-1A0A075B641 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav8-1A0A075B641 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trav8-1A0A075B641 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav8-1A0A075B641 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav8-1A0A075B641 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav8-1A0A075B641 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav8-1A0A075B641 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav8-1A0A075B641 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav8-1A0A075B641 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trav8-1A0A075B641 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav8-1A0A075B641 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav8-1A0A075B641 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav8-1A0A075B641 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav8-1A0A075B641 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC12.69□□□□□ -0.38
Trav8-1A0A075B641 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trav8-1A0A075B641 Gm20628-201ENSMUST00000177363 3215 ntBASIC12.69□□□□□ -0.38
Trav8-1A0A075B641 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav8-1A0A075B641 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav8-1A0A075B641 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav8-1A0A075B641 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Trav8-1A0A075B641 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav8-1A0A075B641 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav8-1A0A075B641 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav8-1A0A075B641 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav8-1A0A075B641 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav8-1A0A075B641 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav8-1A0A075B641 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav8-1A0A075B641 Krt8-ps-201ENSMUST00000208495 945 ntBASIC12.68□□□□□ -0.38
Trav8-1A0A075B641 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC12.68□□□□□ -0.38
Trav8-1A0A075B641 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC12.68□□□□□ -0.38
Trav8-1A0A075B641 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Trav8-1A0A075B641 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav8-1A0A075B641 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav8-1A0A075B641 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav8-1A0A075B641 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav8-1A0A075B641 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav8-1A0A075B641 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Trav8-1A0A075B641 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav8-1A0A075B641 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav8-1A0A075B641 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav8-1A0A075B641 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav8-1A0A075B641 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav8-1A0A075B641 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav8-1A0A075B641 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC12.67□□□□□ -0.38
Trav8-1A0A075B641 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav8-1A0A075B641 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav8-1A0A075B641 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav8-1A0A075B641 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav8-1A0A075B641 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav8-1A0A075B641 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Trav8-1A0A075B641 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms