Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
PTCH2Q9Y6C5 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC23.16■■□□□ 1.3
PTCH2Q9Y6C5 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
PTCH2Q9Y6C5 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC23.16■■□□□ 1.3
PTCH2Q9Y6C5 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
PTCH2Q9Y6C5 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
PTCH2Q9Y6C5 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PTCH2Q9Y6C5 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC23.15■■□□□ 1.3
PTCH2Q9Y6C5 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PTCH2Q9Y6C5 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC23.15■■□□□ 1.3
PTCH2Q9Y6C5 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC23.15■■□□□ 1.3
PTCH2Q9Y6C5 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
PTCH2Q9Y6C5 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC23.15■■□□□ 1.3
PTCH2Q9Y6C5 TMA16-209ENST00000513272 803 ntTSL 2 BASIC23.15■■□□□ 1.3
PTCH2Q9Y6C5 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PTCH2Q9Y6C5 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC23.15■■□□□ 1.3
PTCH2Q9Y6C5 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
PTCH2Q9Y6C5 NBPF21P-201ENST00000425093 1451 ntBASIC23.15■■□□□ 1.3
PTCH2Q9Y6C5 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC23.15■■□□□ 1.3
PTCH2Q9Y6C5 AC010542.4-201ENST00000563151 1910 ntBASIC23.15■■□□□ 1.3
PTCH2Q9Y6C5 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PTCH2Q9Y6C5 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PTCH2Q9Y6C5 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
PTCH2Q9Y6C5 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
PTCH2Q9Y6C5 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC23.15■■□□□ 1.3
PTCH2Q9Y6C5 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC23.15■■□□□ 1.3
PTCH2Q9Y6C5 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.15■■□□□ 1.3
PTCH2Q9Y6C5 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PTCH2Q9Y6C5 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC23.14■■□□□ 1.3
PTCH2Q9Y6C5 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC23.14■■□□□ 1.3
PTCH2Q9Y6C5 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC23.14■■□□□ 1.3
PTCH2Q9Y6C5 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC23.14■■□□□ 1.3
PTCH2Q9Y6C5 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PTCH2Q9Y6C5 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PTCH2Q9Y6C5 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
PTCH2Q9Y6C5 HES2-206ENST00000489730 730 ntTSL 2 BASIC23.14■■□□□ 1.29
PTCH2Q9Y6C5 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC23.14■■□□□ 1.29
PTCH2Q9Y6C5 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC23.14■■□□□ 1.29
PTCH2Q9Y6C5 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC23.14■■□□□ 1.29
PTCH2Q9Y6C5 AL121829.2-201ENST00000620908 328 ntBASIC23.14■■□□□ 1.29
PTCH2Q9Y6C5 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PTCH2Q9Y6C5 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
PTCH2Q9Y6C5 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC23.14■■□□□ 1.29
PTCH2Q9Y6C5 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PTCH2Q9Y6C5 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC23.13■■□□□ 1.29
PTCH2Q9Y6C5 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
PTCH2Q9Y6C5 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
PTCH2Q9Y6C5 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PTCH2Q9Y6C5 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PTCH2Q9Y6C5 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC23.13■■□□□ 1.29
PTCH2Q9Y6C5 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC23.13■■□□□ 1.29
PTCH2Q9Y6C5 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC23.13■■□□□ 1.29
PTCH2Q9Y6C5 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC23.13■■□□□ 1.29
PTCH2Q9Y6C5 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC23.13■■□□□ 1.29
PTCH2Q9Y6C5 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC23.13■■□□□ 1.29
PTCH2Q9Y6C5 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC23.13■■□□□ 1.29
PTCH2Q9Y6C5 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PTCH2Q9Y6C5 AL121894.2-201ENST00000602977 491 ntBASIC23.13■■□□□ 1.29
PTCH2Q9Y6C5 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PTCH2Q9Y6C5 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PTCH2Q9Y6C5 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC23.12■■□□□ 1.29
PTCH2Q9Y6C5 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PTCH2Q9Y6C5 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC23.12■■□□□ 1.29
PTCH2Q9Y6C5 F2R-202ENST00000505600 442 ntTSL 2 BASIC23.12■■□□□ 1.29
PTCH2Q9Y6C5 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC23.12■■□□□ 1.29
PTCH2Q9Y6C5 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC23.12■■□□□ 1.29
PTCH2Q9Y6C5 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC23.12■■□□□ 1.29
PTCH2Q9Y6C5 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PTCH2Q9Y6C5 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PTCH2Q9Y6C5 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PTCH2Q9Y6C5 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC23.12■■□□□ 1.29
PTCH2Q9Y6C5 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PTCH2Q9Y6C5 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PTCH2Q9Y6C5 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC23.12■■□□□ 1.29
PTCH2Q9Y6C5 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PTCH2Q9Y6C5 PGM5P4-201ENST00000421970 445 ntBASIC23.11■■□□□ 1.29
PTCH2Q9Y6C5 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC23.11■■□□□ 1.29
PTCH2Q9Y6C5 FITM1-202ENST00000559294 800 ntBASIC23.11■■□□□ 1.29
PTCH2Q9Y6C5 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PTCH2Q9Y6C5 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC23.11■■□□□ 1.29
PTCH2Q9Y6C5 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PTCH2Q9Y6C5 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
PTCH2Q9Y6C5 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC23.11■■□□□ 1.29
PTCH2Q9Y6C5 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PTCH2Q9Y6C5 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PTCH2Q9Y6C5 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
PTCH2Q9Y6C5 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PTCH2Q9Y6C5 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PTCH2Q9Y6C5 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC23.1■■□□□ 1.29
PTCH2Q9Y6C5 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC23.1■■□□□ 1.29
PTCH2Q9Y6C5 AL356652.1-201ENST00000615962 565 ntBASIC23.1■■□□□ 1.29
PTCH2Q9Y6C5 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PTCH2Q9Y6C5 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PTCH2Q9Y6C5 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC23.1■■□□□ 1.29
PTCH2Q9Y6C5 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PTCH2Q9Y6C5 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC23.1■■□□□ 1.29
PTCH2Q9Y6C5 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC23.09■■□□□ 1.29
PTCH2Q9Y6C5 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
PTCH2Q9Y6C5 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PTCH2Q9Y6C5 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms