Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
PCDHGA9Q9Y5G4 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.03■□□□□ 0.64
PCDHGA9Q9Y5G4 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.03■□□□□ 0.64
PCDHGA9Q9Y5G4 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGA9Q9Y5G4 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.03■□□□□ 0.64
PCDHGA9Q9Y5G4 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.03■□□□□ 0.64
PCDHGA9Q9Y5G4 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGA9Q9Y5G4 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGA9Q9Y5G4 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.03■□□□□ 0.64
PCDHGA9Q9Y5G4 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGA9Q9Y5G4 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGA9Q9Y5G4 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGA9Q9Y5G4 SOX15-203ENST00000570788 1093 ntBASIC19.03■□□□□ 0.64
PCDHGA9Q9Y5G4 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
PCDHGA9Q9Y5G4 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
PCDHGA9Q9Y5G4 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.03■□□□□ 0.64
PCDHGA9Q9Y5G4 AC069544.1-201ENST00000609399 999 ntBASIC19.03■□□□□ 0.64
PCDHGA9Q9Y5G4 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.03■□□□□ 0.64
PCDHGA9Q9Y5G4 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.03■□□□□ 0.64
PCDHGA9Q9Y5G4 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGA9Q9Y5G4 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
PCDHGA9Q9Y5G4 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGA9Q9Y5G4 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.03■□□□□ 0.64
PCDHGA9Q9Y5G4 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGA9Q9Y5G4 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.03■□□□□ 0.64
PCDHGA9Q9Y5G4 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHGA9Q9Y5G4 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.02■□□□□ 0.64
PCDHGA9Q9Y5G4 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHGA9Q9Y5G4 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHGA9Q9Y5G4 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHGA9Q9Y5G4 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.02■□□□□ 0.64
PCDHGA9Q9Y5G4 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.02■□□□□ 0.64
PCDHGA9Q9Y5G4 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.02■□□□□ 0.64
PCDHGA9Q9Y5G4 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.02■□□□□ 0.64
PCDHGA9Q9Y5G4 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.02■□□□□ 0.64
PCDHGA9Q9Y5G4 CYP21A1P-202ENST00000354927 1481 ntBASIC19.02■□□□□ 0.63
PCDHGA9Q9Y5G4 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
PCDHGA9Q9Y5G4 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.02■□□□□ 0.63
PCDHGA9Q9Y5G4 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
PCDHGA9Q9Y5G4 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGA9Q9Y5G4 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGA9Q9Y5G4 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.01■□□□□ 0.63
PCDHGA9Q9Y5G4 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.01■□□□□ 0.63
PCDHGA9Q9Y5G4 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGA9Q9Y5G4 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.01■□□□□ 0.63
PCDHGA9Q9Y5G4 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGA9Q9Y5G4 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGA9Q9Y5G4 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
PCDHGA9Q9Y5G4 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGA9Q9Y5G4 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.01■□□□□ 0.63
PCDHGA9Q9Y5G4 AC105020.6-201ENST00000621523 1217 ntBASIC19.01■□□□□ 0.63
PCDHGA9Q9Y5G4 AC073912.3-201ENST00000624414 853 ntBASIC19.01■□□□□ 0.63
PCDHGA9Q9Y5G4 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.01■□□□□ 0.63
PCDHGA9Q9Y5G4 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.01■□□□□ 0.63
PCDHGA9Q9Y5G4 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGA9Q9Y5G4 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.01■□□□□ 0.63
PCDHGA9Q9Y5G4 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHGA9Q9Y5G4 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19■□□□□ 0.63
PCDHGA9Q9Y5G4 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHGA9Q9Y5G4 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDHGA9Q9Y5G4 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHGA9Q9Y5G4 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
PCDHGA9Q9Y5G4 POM121L13P-201ENST00000422362 380 ntBASIC19■□□□□ 0.63
PCDHGA9Q9Y5G4 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
PCDHGA9Q9Y5G4 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19■□□□□ 0.63
PCDHGA9Q9Y5G4 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDHGA9Q9Y5G4 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19■□□□□ 0.63
PCDHGA9Q9Y5G4 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19■□□□□ 0.63
PCDHGA9Q9Y5G4 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19■□□□□ 0.63
PCDHGA9Q9Y5G4 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19■□□□□ 0.63
PCDHGA9Q9Y5G4 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHGA9Q9Y5G4 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19■□□□□ 0.63
PCDHGA9Q9Y5G4 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHGA9Q9Y5G4 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
PCDHGA9Q9Y5G4 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19■□□□□ 0.63
PCDHGA9Q9Y5G4 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19■□□□□ 0.63
PCDHGA9Q9Y5G4 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDHGA9Q9Y5G4 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19■□□□□ 0.63
PCDHGA9Q9Y5G4 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
PCDHGA9Q9Y5G4 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.99■□□□□ 0.63
PCDHGA9Q9Y5G4 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGA9Q9Y5G4 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
PCDHGA9Q9Y5G4 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
PCDHGA9Q9Y5G4 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.99■□□□□ 0.63
PCDHGA9Q9Y5G4 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
PCDHGA9Q9Y5G4 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.99■□□□□ 0.63
PCDHGA9Q9Y5G4 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGA9Q9Y5G4 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGA9Q9Y5G4 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
PCDHGA9Q9Y5G4 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGA9Q9Y5G4 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGA9Q9Y5G4 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
PCDHGA9Q9Y5G4 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGA9Q9Y5G4 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.99■□□□□ 0.63
PCDHGA9Q9Y5G4 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
PCDHGA9Q9Y5G4 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.99■□□□□ 0.63
PCDHGA9Q9Y5G4 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGA9Q9Y5G4 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGA9Q9Y5G4 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGA9Q9Y5G4 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms