Protein–RNA interactions for Protein: Q9NX63

CHCHD3, MICOS complex subunit MIC19, humanhuman

Known RBP Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3Q9NX63 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
CHCHD3Q9NX63 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CHCHD3Q9NX63 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHCHD3Q9NX63 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CHCHD3Q9NX63 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CHCHD3Q9NX63 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHCHD3Q9NX63 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.85■□□□□ 0.61
CHCHD3Q9NX63 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CHCHD3Q9NX63 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CHCHD3Q9NX63 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHCHD3Q9NX63 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHCHD3Q9NX63 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.85■□□□□ 0.61
CHCHD3Q9NX63 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHCHD3Q9NX63 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.85■□□□□ 0.61
CHCHD3Q9NX63 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHCHD3Q9NX63 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
CHCHD3Q9NX63 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC18.85■□□□□ 0.61
CHCHD3Q9NX63 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHCHD3Q9NX63 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CHCHD3Q9NX63 pRNA.6-201ENST00000610482 90 ntBASIC18.85■□□□□ 0.61
CHCHD3Q9NX63 pRNA.5-201ENST00000612139 90 ntBASIC18.85■□□□□ 0.61
CHCHD3Q9NX63 pRNA.11-201ENST00000618423 90 ntBASIC18.85■□□□□ 0.61
CHCHD3Q9NX63 pRNA.13-201ENST00000619112 90 ntBASIC18.85■□□□□ 0.61
CHCHD3Q9NX63 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
CHCHD3Q9NX63 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHCHD3Q9NX63 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHCHD3Q9NX63 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.85■□□□□ 0.61
CHCHD3Q9NX63 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHCHD3Q9NX63 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CHCHD3Q9NX63 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CHCHD3Q9NX63 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHCHD3Q9NX63 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHCHD3Q9NX63 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CHCHD3Q9NX63 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CHCHD3Q9NX63 AC003102.1-202ENST00000563394 1796 ntBASIC18.84■□□□□ 0.61
CHCHD3Q9NX63 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CHCHD3Q9NX63 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHCHD3Q9NX63 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CHCHD3Q9NX63 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
CHCHD3Q9NX63 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHCHD3Q9NX63 RNF146-205ENST00000477776 762 ntTSL 3 BASIC18.84■□□□□ 0.61
CHCHD3Q9NX63 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHCHD3Q9NX63 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC18.84■□□□□ 0.61
CHCHD3Q9NX63 AL033527.3-201ENST00000566366 1196 ntBASIC18.84■□□□□ 0.61
CHCHD3Q9NX63 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHCHD3Q9NX63 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.84■□□□□ 0.61
CHCHD3Q9NX63 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CHCHD3Q9NX63 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHCHD3Q9NX63 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.84■□□□□ 0.61
CHCHD3Q9NX63 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHCHD3Q9NX63 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHCHD3Q9NX63 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHCHD3Q9NX63 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CHCHD3Q9NX63 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CHCHD3Q9NX63 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CHCHD3Q9NX63 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHCHD3Q9NX63 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHCHD3Q9NX63 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.83■□□□□ 0.61
CHCHD3Q9NX63 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
CHCHD3Q9NX63 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CHCHD3Q9NX63 AC007613.1-201ENST00000572811 2597 ntBASIC18.83■□□□□ 0.6
CHCHD3Q9NX63 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHCHD3Q9NX63 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CHCHD3Q9NX63 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHCHD3Q9NX63 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHCHD3Q9NX63 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.6
CHCHD3Q9NX63 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHCHD3Q9NX63 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHCHD3Q9NX63 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.83■□□□□ 0.6
CHCHD3Q9NX63 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHCHD3Q9NX63 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHCHD3Q9NX63 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
CHCHD3Q9NX63 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CHCHD3Q9NX63 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CHCHD3Q9NX63 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHCHD3Q9NX63 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHCHD3Q9NX63 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHCHD3Q9NX63 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.6
CHCHD3Q9NX63 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.83■□□□□ 0.6
CHCHD3Q9NX63 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CHCHD3Q9NX63 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.83■□□□□ 0.6
CHCHD3Q9NX63 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHCHD3Q9NX63 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.6
CHCHD3Q9NX63 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CHCHD3Q9NX63 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHCHD3Q9NX63 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHCHD3Q9NX63 AC073314.1-201ENST00000568729 2216 ntBASIC18.82■□□□□ 0.6
CHCHD3Q9NX63 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHCHD3Q9NX63 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHCHD3Q9NX63 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHCHD3Q9NX63 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHCHD3Q9NX63 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.82■□□□□ 0.6
CHCHD3Q9NX63 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHCHD3Q9NX63 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.82■□□□□ 0.6
CHCHD3Q9NX63 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHCHD3Q9NX63 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHCHD3Q9NX63 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHCHD3Q9NX63 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CHCHD3Q9NX63 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.82■□□□□ 0.6
CHCHD3Q9NX63 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms