Protein–RNA interactions for Protein: Q8NG48

LINS1, Protein Lines homolog 1, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINS1Q8NG48 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
LINS1Q8NG48 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
LINS1Q8NG48 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC25.59■■□□□ 1.69
LINS1Q8NG48 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
LINS1Q8NG48 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
LINS1Q8NG48 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC25.59■■□□□ 1.69
LINS1Q8NG48 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC25.59■■□□□ 1.69
LINS1Q8NG48 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC25.59■■□□□ 1.69
LINS1Q8NG48 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC25.59■■□□□ 1.69
LINS1Q8NG48 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC25.59■■□□□ 1.69
LINS1Q8NG48 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC25.59■■□□□ 1.69
LINS1Q8NG48 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
LINS1Q8NG48 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
LINS1Q8NG48 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC25.59■■□□□ 1.69
LINS1Q8NG48 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
LINS1Q8NG48 AL121603.2-201ENST00000557373 2117 ntBASIC25.58■■□□□ 1.69
LINS1Q8NG48 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
LINS1Q8NG48 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC25.58■■□□□ 1.69
LINS1Q8NG48 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
LINS1Q8NG48 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.69
LINS1Q8NG48 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC25.58■■□□□ 1.69
LINS1Q8NG48 OR2A1-AS1-207ENST00000486094 819 ntBASIC25.58■■□□□ 1.69
LINS1Q8NG48 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
LINS1Q8NG48 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
LINS1Q8NG48 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
LINS1Q8NG48 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC25.57■■□□□ 1.68
LINS1Q8NG48 PRORSD1P-201ENST00000295112 541 ntBASIC25.57■■□□□ 1.68
LINS1Q8NG48 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
LINS1Q8NG48 KRT18P29-201ENST00000397031 1267 ntBASIC25.57■■□□□ 1.68
LINS1Q8NG48 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
LINS1Q8NG48 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
LINS1Q8NG48 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC25.57■■□□□ 1.68
LINS1Q8NG48 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
LINS1Q8NG48 AC006058.3-201ENST00000606217 1069 ntBASIC25.57■■□□□ 1.68
LINS1Q8NG48 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC25.57■■□□□ 1.68
LINS1Q8NG48 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
LINS1Q8NG48 AC007375.3-201ENST00000600936 2314 ntBASIC25.57■■□□□ 1.68
LINS1Q8NG48 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC25.57■■□□□ 1.68
LINS1Q8NG48 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
LINS1Q8NG48 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
LINS1Q8NG48 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC25.56■■□□□ 1.68
LINS1Q8NG48 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
LINS1Q8NG48 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC25.56■■□□□ 1.68
LINS1Q8NG48 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC25.56■■□□□ 1.68
LINS1Q8NG48 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC25.56■■□□□ 1.68
LINS1Q8NG48 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
LINS1Q8NG48 SOX15-203ENST00000570788 1093 ntBASIC25.56■■□□□ 1.68
LINS1Q8NG48 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC25.56■■□□□ 1.68
LINS1Q8NG48 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
LINS1Q8NG48 MOK-233ENST00000524214 1539 ntTSL 2 BASIC25.56■■□□□ 1.68
LINS1Q8NG48 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
LINS1Q8NG48 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
LINS1Q8NG48 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
LINS1Q8NG48 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
LINS1Q8NG48 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
LINS1Q8NG48 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC25.55■■□□□ 1.68
LINS1Q8NG48 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
LINS1Q8NG48 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
LINS1Q8NG48 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
LINS1Q8NG48 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
LINS1Q8NG48 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC25.55■■□□□ 1.68
LINS1Q8NG48 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC25.55■■□□□ 1.68
LINS1Q8NG48 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC25.55■■□□□ 1.68
LINS1Q8NG48 AC005829.2-201ENST00000571422 1056 ntBASIC25.55■■□□□ 1.68
LINS1Q8NG48 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC25.55■■□□□ 1.68
LINS1Q8NG48 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
LINS1Q8NG48 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
LINS1Q8NG48 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
LINS1Q8NG48 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
LINS1Q8NG48 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC25.54■■□□□ 1.68
LINS1Q8NG48 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
LINS1Q8NG48 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC25.54■■□□□ 1.68
LINS1Q8NG48 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
LINS1Q8NG48 GGT1-206ENST00000404223 952 ntTSL 2 BASIC25.54■■□□□ 1.68
LINS1Q8NG48 AC128676.1-201ENST00000454392 318 ntBASIC25.54■■□□□ 1.68
LINS1Q8NG48 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC25.54■■□□□ 1.68
LINS1Q8NG48 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
LINS1Q8NG48 KLF2-202ENST00000592003 564 ntTSL 3 BASIC25.54■■□□□ 1.68
LINS1Q8NG48 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
LINS1Q8NG48 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC25.54■■□□□ 1.68
LINS1Q8NG48 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
LINS1Q8NG48 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
LINS1Q8NG48 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
LINS1Q8NG48 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC25.54■■□□□ 1.68
LINS1Q8NG48 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
LINS1Q8NG48 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC25.53■■□□□ 1.68
LINS1Q8NG48 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
LINS1Q8NG48 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC25.53■■□□□ 1.68
LINS1Q8NG48 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
LINS1Q8NG48 AC008687.6-201ENST00000596318 630 ntBASIC25.53■■□□□ 1.68
LINS1Q8NG48 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
LINS1Q8NG48 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
LINS1Q8NG48 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC25.53■■□□□ 1.68
LINS1Q8NG48 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
LINS1Q8NG48 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC25.53■■□□□ 1.68
LINS1Q8NG48 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC25.53■■□□□ 1.68
LINS1Q8NG48 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
LINS1Q8NG48 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
LINS1Q8NG48 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
LINS1Q8NG48 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms