Protein–RNA interactions for Protein: Q8NBN7

RDH13, Retinol dehydrogenase 13, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13Q8NBN7 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RDH13Q8NBN7 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RDH13Q8NBN7 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC22.29■■□□□ 1.16
RDH13Q8NBN7 AC090192.1-201ENST00000517740 490 ntBASIC22.29■■□□□ 1.16
RDH13Q8NBN7 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC22.29■■□□□ 1.16
RDH13Q8NBN7 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC22.29■■□□□ 1.16
RDH13Q8NBN7 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
RDH13Q8NBN7 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
RDH13Q8NBN7 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RDH13Q8NBN7 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
RDH13Q8NBN7 CYP21A1P-202ENST00000354927 1481 ntBASIC22.28■■□□□ 1.16
RDH13Q8NBN7 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC22.28■■□□□ 1.16
RDH13Q8NBN7 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC22.28■■□□□ 1.16
RDH13Q8NBN7 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
RDH13Q8NBN7 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
RDH13Q8NBN7 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RDH13Q8NBN7 AL355472.2-201ENST00000422958 438 ntBASIC22.28■■□□□ 1.16
RDH13Q8NBN7 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC22.28■■□□□ 1.16
RDH13Q8NBN7 AC006970.2-201ENST00000450065 779 ntBASIC22.28■■□□□ 1.16
RDH13Q8NBN7 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
RDH13Q8NBN7 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC22.28■■□□□ 1.16
RDH13Q8NBN7 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC22.28■■□□□ 1.16
RDH13Q8NBN7 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RDH13Q8NBN7 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RDH13Q8NBN7 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC22.28■■□□□ 1.16
RDH13Q8NBN7 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RDH13Q8NBN7 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC22.28■■□□□ 1.16
RDH13Q8NBN7 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
RDH13Q8NBN7 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
RDH13Q8NBN7 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RDH13Q8NBN7 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RDH13Q8NBN7 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC22.27■■□□□ 1.16
RDH13Q8NBN7 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC22.27■■□□□ 1.16
RDH13Q8NBN7 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC22.27■■□□□ 1.16
RDH13Q8NBN7 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC22.27■■□□□ 1.16
RDH13Q8NBN7 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RDH13Q8NBN7 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
RDH13Q8NBN7 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RDH13Q8NBN7 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RDH13Q8NBN7 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RDH13Q8NBN7 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
RDH13Q8NBN7 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RDH13Q8NBN7 PPP1R14BP3-201ENST00000509033 445 ntBASIC22.27■■□□□ 1.16
RDH13Q8NBN7 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
RDH13Q8NBN7 AC105036.2-201ENST00000569468 176 ntBASIC22.27■■□□□ 1.16
RDH13Q8NBN7 OR10C1-204ENST00000622521 1039 ntBASIC22.27■■□□□ 1.16
RDH13Q8NBN7 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
RDH13Q8NBN7 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC22.27■■□□□ 1.16
RDH13Q8NBN7 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RDH13Q8NBN7 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
RDH13Q8NBN7 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
RDH13Q8NBN7 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RDH13Q8NBN7 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
RDH13Q8NBN7 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RDH13Q8NBN7 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC22.26■■□□□ 1.15
RDH13Q8NBN7 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC22.26■■□□□ 1.15
RDH13Q8NBN7 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
RDH13Q8NBN7 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RDH13Q8NBN7 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RDH13Q8NBN7 WT1-AS_3.1-201ENST00000613262 234 ntBASIC22.26■■□□□ 1.15
RDH13Q8NBN7 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RDH13Q8NBN7 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RDH13Q8NBN7 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC22.26■■□□□ 1.15
RDH13Q8NBN7 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC22.26■■□□□ 1.15
RDH13Q8NBN7 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC22.25■■□□□ 1.15
RDH13Q8NBN7 AC010980.2-201ENST00000587099 1412 ntBASIC22.25■■□□□ 1.15
RDH13Q8NBN7 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC22.25■■□□□ 1.15
RDH13Q8NBN7 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RDH13Q8NBN7 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RDH13Q8NBN7 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC22.25■■□□□ 1.15
RDH13Q8NBN7 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC22.25■■□□□ 1.15
RDH13Q8NBN7 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RDH13Q8NBN7 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC22.25■■□□□ 1.15
RDH13Q8NBN7 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
RDH13Q8NBN7 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
RDH13Q8NBN7 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
RDH13Q8NBN7 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RDH13Q8NBN7 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC22.25■■□□□ 1.15
RDH13Q8NBN7 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RDH13Q8NBN7 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RDH13Q8NBN7 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC22.24■■□□□ 1.15
RDH13Q8NBN7 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC22.24■■□□□ 1.15
RDH13Q8NBN7 MAP2K4P1-201ENST00000438453 1195 ntBASIC22.24■■□□□ 1.15
RDH13Q8NBN7 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
RDH13Q8NBN7 AC083906.2-201ENST00000511578 360 ntBASIC22.24■■□□□ 1.15
RDH13Q8NBN7 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC22.24■■□□□ 1.15
RDH13Q8NBN7 AF201337.1-201ENST00000520239 748 ntBASIC22.24■■□□□ 1.15
RDH13Q8NBN7 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC22.24■■□□□ 1.15
RDH13Q8NBN7 AC133552.2-202ENST00000575694 574 ntBASIC22.24■■□□□ 1.15
RDH13Q8NBN7 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC22.24■■□□□ 1.15
RDH13Q8NBN7 GXYLT1P5-201ENST00000614548 1189 ntBASIC22.24■■□□□ 1.15
RDH13Q8NBN7 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC22.24■■□□□ 1.15
RDH13Q8NBN7 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
RDH13Q8NBN7 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC22.24■■□□□ 1.15
RDH13Q8NBN7 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC22.24■■□□□ 1.15
RDH13Q8NBN7 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC22.23■■□□□ 1.15
RDH13Q8NBN7 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
RDH13Q8NBN7 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC22.23■■□□□ 1.15
RDH13Q8NBN7 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
RDH13Q8NBN7 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms