Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.32■□□□□ 0.84
TMEFF1Q8IYR6 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.32■□□□□ 0.84
TMEFF1Q8IYR6 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TMEFF1Q8IYR6 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TMEFF1Q8IYR6 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.32■□□□□ 0.84
TMEFF1Q8IYR6 PGM5P4-201ENST00000421970 445 ntBASIC20.32■□□□□ 0.84
TMEFF1Q8IYR6 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TMEFF1Q8IYR6 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TMEFF1Q8IYR6 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
TMEFF1Q8IYR6 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.32■□□□□ 0.84
TMEFF1Q8IYR6 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
TMEFF1Q8IYR6 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TMEFF1Q8IYR6 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.32■□□□□ 0.84
TMEFF1Q8IYR6 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TMEFF1Q8IYR6 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
TMEFF1Q8IYR6 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TMEFF1Q8IYR6 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TMEFF1Q8IYR6 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.32■□□□□ 0.84
TMEFF1Q8IYR6 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.32■□□□□ 0.84
TMEFF1Q8IYR6 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
TMEFF1Q8IYR6 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TMEFF1Q8IYR6 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TMEFF1Q8IYR6 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TMEFF1Q8IYR6 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
TMEFF1Q8IYR6 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.31■□□□□ 0.84
TMEFF1Q8IYR6 AC087499.1-201ENST00000418141 1075 ntBASIC20.31■□□□□ 0.84
TMEFF1Q8IYR6 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TMEFF1Q8IYR6 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TMEFF1Q8IYR6 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TMEFF1Q8IYR6 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.31■□□□□ 0.84
TMEFF1Q8IYR6 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TMEFF1Q8IYR6 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
TMEFF1Q8IYR6 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TMEFF1Q8IYR6 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TMEFF1Q8IYR6 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TMEFF1Q8IYR6 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.3■□□□□ 0.84
TMEFF1Q8IYR6 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
TMEFF1Q8IYR6 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
TMEFF1Q8IYR6 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.3■□□□□ 0.84
TMEFF1Q8IYR6 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.3■□□□□ 0.84
TMEFF1Q8IYR6 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.3■□□□□ 0.84
TMEFF1Q8IYR6 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TMEFF1Q8IYR6 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TMEFF1Q8IYR6 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.3■□□□□ 0.84
TMEFF1Q8IYR6 PRKY-204ENST00000533551 1019 ntBASIC20.3■□□□□ 0.84
TMEFF1Q8IYR6 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.3■□□□□ 0.84
TMEFF1Q8IYR6 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TMEFF1Q8IYR6 AL356652.1-201ENST00000615962 565 ntBASIC20.3■□□□□ 0.84
TMEFF1Q8IYR6 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TMEFF1Q8IYR6 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.3■□□□□ 0.84
TMEFF1Q8IYR6 ECEL1P1-201ENST00000373592 1742 ntBASIC20.3■□□□□ 0.84
TMEFF1Q8IYR6 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.3■□□□□ 0.84
TMEFF1Q8IYR6 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TMEFF1Q8IYR6 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TMEFF1Q8IYR6 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
TMEFF1Q8IYR6 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
TMEFF1Q8IYR6 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.29■□□□□ 0.84
TMEFF1Q8IYR6 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TMEFF1Q8IYR6 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20.29■□□□□ 0.84
TMEFF1Q8IYR6 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TMEFF1Q8IYR6 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TMEFF1Q8IYR6 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.29■□□□□ 0.84
TMEFF1Q8IYR6 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TMEFF1Q8IYR6 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TMEFF1Q8IYR6 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.29■□□□□ 0.84
TMEFF1Q8IYR6 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.29■□□□□ 0.84
TMEFF1Q8IYR6 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.29■□□□□ 0.84
TMEFF1Q8IYR6 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.29■□□□□ 0.84
TMEFF1Q8IYR6 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.29■□□□□ 0.84
TMEFF1Q8IYR6 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.29■□□□□ 0.84
TMEFF1Q8IYR6 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TMEFF1Q8IYR6 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TMEFF1Q8IYR6 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TMEFF1Q8IYR6 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TMEFF1Q8IYR6 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
TMEFF1Q8IYR6 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.29■□□□□ 0.84
TMEFF1Q8IYR6 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMEFF1Q8IYR6 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.28■□□□□ 0.84
TMEFF1Q8IYR6 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMEFF1Q8IYR6 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.28■□□□□ 0.84
TMEFF1Q8IYR6 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMEFF1Q8IYR6 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TMEFF1Q8IYR6 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMEFF1Q8IYR6 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMEFF1Q8IYR6 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMEFF1Q8IYR6 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMEFF1Q8IYR6 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMEFF1Q8IYR6 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TMEFF1Q8IYR6 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TMEFF1Q8IYR6 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.28■□□□□ 0.84
TMEFF1Q8IYR6 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.28■□□□□ 0.84
TMEFF1Q8IYR6 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TMEFF1Q8IYR6 AL355075.4-201ENST00000554988 638 ntBASIC20.28■□□□□ 0.84
TMEFF1Q8IYR6 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMEFF1Q8IYR6 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC20.28■□□□□ 0.84
TMEFF1Q8IYR6 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.28■□□□□ 0.84
TMEFF1Q8IYR6 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
TMEFF1Q8IYR6 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
TMEFF1Q8IYR6 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
TMEFF1Q8IYR6 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms