Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.52■□□□□ 0.56
TMEM53Q6P2H8 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.52■□□□□ 0.56
TMEM53Q6P2H8 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
TMEM53Q6P2H8 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TMEM53Q6P2H8 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TMEM53Q6P2H8 AC097381.1-201ENST00000429019 1296 ntBASIC18.52■□□□□ 0.56
TMEM53Q6P2H8 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.52■□□□□ 0.56
TMEM53Q6P2H8 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TMEM53Q6P2H8 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TMEM53Q6P2H8 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.52■□□□□ 0.56
TMEM53Q6P2H8 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TMEM53Q6P2H8 KRT87P-202ENST00000534226 1464 ntBASIC18.52■□□□□ 0.55
TMEM53Q6P2H8 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.55
TMEM53Q6P2H8 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TMEM53Q6P2H8 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TMEM53Q6P2H8 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TMEM53Q6P2H8 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
TMEM53Q6P2H8 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TMEM53Q6P2H8 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.51■□□□□ 0.55
TMEM53Q6P2H8 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TMEM53Q6P2H8 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TMEM53Q6P2H8 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TMEM53Q6P2H8 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.51■□□□□ 0.55
TMEM53Q6P2H8 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.51■□□□□ 0.55
TMEM53Q6P2H8 MIR6821-201ENST00000617625 74 ntBASIC18.51■□□□□ 0.55
TMEM53Q6P2H8 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TMEM53Q6P2H8 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TMEM53Q6P2H8 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.51■□□□□ 0.55
TMEM53Q6P2H8 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TMEM53Q6P2H8 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TMEM53Q6P2H8 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TMEM53Q6P2H8 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
TMEM53Q6P2H8 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TMEM53Q6P2H8 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TMEM53Q6P2H8 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TMEM53Q6P2H8 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TMEM53Q6P2H8 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TMEM53Q6P2H8 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.5■□□□□ 0.55
TMEM53Q6P2H8 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.5■□□□□ 0.55
TMEM53Q6P2H8 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TMEM53Q6P2H8 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
TMEM53Q6P2H8 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TMEM53Q6P2H8 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
TMEM53Q6P2H8 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TMEM53Q6P2H8 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TMEM53Q6P2H8 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
TMEM53Q6P2H8 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TMEM53Q6P2H8 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TMEM53Q6P2H8 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
TMEM53Q6P2H8 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TMEM53Q6P2H8 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TMEM53Q6P2H8 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TMEM53Q6P2H8 AC034268.1-201ENST00000441047 882 ntBASIC18.5■□□□□ 0.55
TMEM53Q6P2H8 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC18.5■□□□□ 0.55
TMEM53Q6P2H8 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
TMEM53Q6P2H8 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.5■□□□□ 0.55
TMEM53Q6P2H8 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.5■□□□□ 0.55
TMEM53Q6P2H8 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TMEM53Q6P2H8 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TMEM53Q6P2H8 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.5■□□□□ 0.55
TMEM53Q6P2H8 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TMEM53Q6P2H8 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TMEM53Q6P2H8 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TMEM53Q6P2H8 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.49■□□□□ 0.55
TMEM53Q6P2H8 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.49■□□□□ 0.55
TMEM53Q6P2H8 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.49■□□□□ 0.55
TMEM53Q6P2H8 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TMEM53Q6P2H8 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
TMEM53Q6P2H8 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
TMEM53Q6P2H8 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
TMEM53Q6P2H8 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.49■□□□□ 0.55
TMEM53Q6P2H8 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.49■□□□□ 0.55
TMEM53Q6P2H8 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.49■□□□□ 0.55
TMEM53Q6P2H8 RARRES2P6-201ENST00000567333 442 ntBASIC18.49■□□□□ 0.55
TMEM53Q6P2H8 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC18.49■□□□□ 0.55
TMEM53Q6P2H8 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TMEM53Q6P2H8 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TMEM53Q6P2H8 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TMEM53Q6P2H8 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.49■□□□□ 0.55
TMEM53Q6P2H8 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TMEM53Q6P2H8 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TMEM53Q6P2H8 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TMEM53Q6P2H8 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TMEM53Q6P2H8 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
TMEM53Q6P2H8 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
TMEM53Q6P2H8 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TMEM53Q6P2H8 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TMEM53Q6P2H8 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TMEM53Q6P2H8 AC004408.2-201ENST00000623613 2777 ntBASIC18.48■□□□□ 0.55
TMEM53Q6P2H8 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TMEM53Q6P2H8 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TMEM53Q6P2H8 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.48■□□□□ 0.55
TMEM53Q6P2H8 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.48■□□□□ 0.55
TMEM53Q6P2H8 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TMEM53Q6P2H8 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TMEM53Q6P2H8 AC106820.2-201ENST00000563775 3264 ntBASIC18.48■□□□□ 0.55
TMEM53Q6P2H8 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.48■□□□□ 0.55
TMEM53Q6P2H8 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TMEM53Q6P2H8 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TMEM53Q6P2H8 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms