Protein–RNA interactions for Protein: Q495D7

LINC01559, Putative uncharacterized protein encoded by LINC01559, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01559Q495D7 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC01559Q495D7 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LINC01559Q495D7 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC01559Q495D7 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC01559Q495D7 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LINC01559Q495D7 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LINC01559Q495D7 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LINC01559Q495D7 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC01559Q495D7 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
LINC01559Q495D7 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
LINC01559Q495D7 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC01559Q495D7 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC15.14■□□□□ 0.01
LINC01559Q495D7 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC15.14■□□□□ 0.01
LINC01559Q495D7 LHPP-203ENST00000392757 840 ntTSL 3 BASIC15.14■□□□□ 0.01
LINC01559Q495D7 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC15.14■□□□□ 0.01
LINC01559Q495D7 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC15.14■□□□□ 0.01
LINC01559Q495D7 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC15.14■□□□□ 0.01
LINC01559Q495D7 AC013391.2-201ENST00000559041 501 ntTSL 5 BASIC15.14■□□□□ 0.01
LINC01559Q495D7 MIR4767-201ENST00000582827 78 ntBASIC15.14■□□□□ 0.01
LINC01559Q495D7 AL031670.1-201ENST00000619343 669 ntTSL 3 BASIC15.14■□□□□ 0.01
LINC01559Q495D7 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC01559Q495D7 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC15.14■□□□□ 0.01
LINC01559Q495D7 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC15.14■□□□□ 0.01
LINC01559Q495D7 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LINC01559Q495D7 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LINC01559Q495D7 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC01559Q495D7 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC01559Q495D7 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC15.14■□□□□ 0.01
LINC01559Q495D7 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
LINC01559Q495D7 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC15.14■□□□□ 0.01
LINC01559Q495D7 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC01559Q495D7 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC01559Q495D7 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC15.13■□□□□ 0.01
LINC01559Q495D7 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LINC01559Q495D7 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC01559Q495D7 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC15.13■□□□□ 0.01
LINC01559Q495D7 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
LINC01559Q495D7 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC01559Q495D7 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC15.13■□□□□ 0.01
LINC01559Q495D7 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC01559Q495D7 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
LINC01559Q495D7 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC01559Q495D7 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC15.13■□□□□ 0.01
LINC01559Q495D7 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC01559Q495D7 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC01559Q495D7 MFF-208ENST00000409616 1247 ntTSL 5 BASIC15.13■□□□□ 0.01
LINC01559Q495D7 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC15.13■□□□□ 0.01
LINC01559Q495D7 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC01559Q495D7 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC15.13■□□□□ 0.01
LINC01559Q495D7 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LINC01559Q495D7 AC105233.4-201ENST00000642045 216 ntBASIC15.13■□□□□ 0.01
LINC01559Q495D7 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
LINC01559Q495D7 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC01559Q495D7 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LINC01559Q495D7 AC018445.3-201ENST00000624177 1945 ntBASIC15.13■□□□□ 0.01
LINC01559Q495D7 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC01559Q495D7 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC15.13■□□□□ 0.01
LINC01559Q495D7 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC01559Q495D7 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC01559Q495D7 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
LINC01559Q495D7 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC01559Q495D7 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC01559Q495D7 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LINC01559Q495D7 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
LINC01559Q495D7 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LINC01559Q495D7 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC01559Q495D7 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC15.12■□□□□ 0.01
LINC01559Q495D7 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC01559Q495D7 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC15.12■□□□□ 0.01
LINC01559Q495D7 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
LINC01559Q495D7 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC01559Q495D7 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LINC01559Q495D7 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
LINC01559Q495D7 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
LINC01559Q495D7 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LINC01559Q495D7 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC15.12■□□□□ 0.01
LINC01559Q495D7 AL356441.2-201ENST00000443009 864 ntBASIC15.12■□□□□ 0.01
LINC01559Q495D7 AC131281.2-201ENST00000520478 145 ntBASIC15.12■□□□□ 0.01
LINC01559Q495D7 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC15.12■□□□□ 0.01
LINC01559Q495D7 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LINC01559Q495D7 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
LINC01559Q495D7 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC15.12■□□□□ 0.01
LINC01559Q495D7 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
LINC01559Q495D7 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
LINC01559Q495D7 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC01559Q495D7 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC15.12■□□□□ 0.01
LINC01559Q495D7 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC01559Q495D7 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
LINC01559Q495D7 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC01559Q495D7 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
LINC01559Q495D7 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC01559Q495D7 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC15.11■□□□□ 0.01
LINC01559Q495D7 AC061975.6-201ENST00000579045 1553 ntBASIC15.11■□□□□ 0.01
LINC01559Q495D7 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC15.11■□□□□ 0.01
LINC01559Q495D7 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LINC01559Q495D7 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
LINC01559Q495D7 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC01559Q495D7 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC01559Q495D7 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC01559Q495D7 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms