Protein–RNA interactions for Protein: Q06406

LSM6, U6 snRNA-associated Sm-like protein LSm6, yeastyeast

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM6Q06406 STB6YKL072W 2301 nt0.48□□□□□ -2.33
LSM6Q06406 COG7YGL005C 840 nt0.48□□□□□ -2.33
LSM6Q06406 GOS1YHL031C 672 nt0.48□□□□□ -2.33
LSM6Q06406 YHL037CYHL037C 402 nt0.48□□□□□ -2.33
LSM6Q06406 GRX8YLR364W 330 nt0.48□□□□□ -2.33
LSM6Q06406 PGA1YNL158W 597 nt0.48□□□□□ -2.33
LSM6Q06406 MGR1YCL044C 1254 nt0.48□□□□□ -2.33
LSM6Q06406 KIP1YBL063W 3336 nt0.48□□□□□ -2.33
LSM6Q06406 YBP2YGL060W 1926 nt0.47□□□□□ -2.33
LSM6Q06406 SLU7YDR088C 1149 nt0.47□□□□□ -2.33
LSM6Q06406 YDR521WYDR521W 336 nt0.47□□□□□ -2.33
LSM6Q06406 TMA20YER007C-A 546 nt0.47□□□□□ -2.33
LSM6Q06406 RTR1YER139C 681 nt0.47□□□□□ -2.33
LSM6Q06406 YGR018CYGR018C 330 nt0.47□□□□□ -2.33
LSM6Q06406 RPL16AYIL133C 600 nt0.47□□□□□ -2.33
LSM6Q06406 YIR020CYIR020C 303 nt0.47□□□□□ -2.33
LSM6Q06406 YJL127C-BYJL127C-B 159 nt0.47□□□□□ -2.33
LSM6Q06406 ATP18YML081C-A 180 nt0.47□□□□□ -2.33
LSM6Q06406 YPR142CYPR142C 564 nt0.47□□□□□ -2.33
LSM6Q06406 CDC39YCR093W 6327 nt0.47□□□□□ -2.33
LSM6Q06406 ESA1YOR244W 1338 nt0.46□□□□□ -2.34
LSM6Q06406 YGL217CYGL217C 342 nt0.46□□□□□ -2.34
LSM6Q06406 BTN2YGR142W 1233 nt0.46□□□□□ -2.34
LSM6Q06406 PEP8YJL053W 1140 nt0.46□□□□□ -2.34
LSM6Q06406 CMC4YMR194C-B 222 nt0.46□□□□□ -2.34
LSM6Q06406 YPL039WYPL039W 951 nt0.46□□□□□ -2.34
LSM6Q06406 RAD50YNL250W 3939 nt0.46□□□□□ -2.34
LSM6Q06406 SLX4YLR135W 2247 nt0.45□□□□□ -2.34
LSM6Q06406 RRI1YDL216C 1323 nt0.45□□□□□ -2.34
LSM6Q06406 TSA2YDR453C 591 nt0.45□□□□□ -2.34
LSM6Q06406 YIR020C-BYIR020C-B 735 nt0.45□□□□□ -2.34
LSM6Q06406 RPC25YKL144C 639 nt0.45□□□□□ -2.34
LSM6Q06406 RPL40BYKR094C 387 nt0.45□□□□□ -2.34
LSM6Q06406 YLR458WYLR458W 381 nt0.45□□□□□ -2.34
LSM6Q06406 SWS2YNL081C 432 nt0.45□□□□□ -2.34
LSM6Q06406 YPR159C-AYPR159C-A 102 nt0.45□□□□□ -2.34
LSM6Q06406 AIM9YER080W 1884 nt0.45□□□□□ -2.34
LSM6Q06406 UTP10YJL109C 5310 nt0.45□□□□□ -2.34
LSM6Q06406 NUP145YGL092W 3954 nt0.44□□□□□ -2.34
LSM6Q06406 YML002WYML002W 2214 nt0.44□□□□□ -2.34
LSM6Q06406 YCR043CYCR043C 384 nt0.44□□□□□ -2.34
LSM6Q06406 COX6YHR051W 447 nt0.44□□□□□ -2.34
LSM6Q06406 PPE1YHR075C 1203 nt0.44□□□□□ -2.34
LSM6Q06406 NEJ1YLR265C 1029 nt0.44□□□□□ -2.34
LSM6Q06406 YML003WYML003W 873 nt0.44□□□□□ -2.34
LSM6Q06406 YOL085W-AYOL085W-A 213 nt0.44□□□□□ -2.34
LSM6Q06406 YOR161W-BYOR161W-B 261 nt0.44□□□□□ -2.34
LSM6Q06406 REV3YPL167C 4515 nt0.43□□□□□ -2.34
LSM6Q06406 URA10YMR271C 684 nt0.43□□□□□ -2.34
LSM6Q06406 YBL083CYBL083C 426 nt0.43□□□□□ -2.34
LSM6Q06406 YLL054CYLL054C 2532 nt0.43□□□□□ -2.34
LSM6Q06406 SWI4YER111C 3282 nt0.43□□□□□ -2.34
LSM6Q06406 UTP13YLR222C 2454 nt0.42□□□□□ -2.34
LSM6Q06406 SLD5YDR489W 885 nt0.42□□□□□ -2.34
LSM6Q06406 MZM1YDR493W 372 nt0.42□□□□□ -2.34
LSM6Q06406 RSM28YDR494W 1086 nt0.42□□□□□ -2.34
LSM6Q06406 YOL159C-AYOL159C-A 273 nt0.42□□□□□ -2.34
LSM6Q06406 KAR9YPL269W 1935 nt0.42□□□□□ -2.34
LSM6Q06406 APL3YBL037W 3078 nt0.41□□□□□ -2.34
LSM6Q06406 TTI1YKL033W 3117 nt0.41□□□□□ -2.34
LSM6Q06406 YCR016WYCR016W 873 nt0.41□□□□□ -2.34
LSM6Q06406 YFL012W-AYFL012W-A 375 nt0.41□□□□□ -2.34
LSM6Q06406 VMA7YGR020C 357 nt0.41□□□□□ -2.34
LSM6Q06406 LAG1YHL003C 1236 nt0.41□□□□□ -2.34
LSM6Q06406 YNL010WYNL010W 726 nt0.41□□□□□ -2.34
LSM6Q06406 SFG1YOR315W 1041 nt0.41□□□□□ -2.34
LSM6Q06406 NUP157YER105C 4176 nt0.41□□□□□ -2.34
LSM6Q06406 NOT5YPR072W 1683 nt0.4□□□□□ -2.34
LSM6Q06406 YDR248CYDR248C 582 nt0.4□□□□□ -2.35
LSM6Q06406 DUO1YGL061C 744 nt0.4□□□□□ -2.35
LSM6Q06406 CCE1YKL011C 1062 nt0.4□□□□□ -2.35
LSM6Q06406 YOL150CYOL150C 312 nt0.4□□□□□ -2.35
LSM6Q06406 RRP15YPR143W 753 nt0.4□□□□□ -2.35
LSM6Q06406 SWT1YOR166C 1377 nt0.4□□□□□ -2.35
LSM6Q06406 GDS1YOR355W 1569 nt0.4□□□□□ -2.35
LSM6Q06406 OSH6YKR003W 1347 nt0.39□□□□□ -2.35
LSM6Q06406 GPM2YDL021W 936 nt0.39□□□□□ -2.35
LSM6Q06406 SNU23YDL098C 585 nt0.39□□□□□ -2.35
LSM6Q06406 CYC7YEL039C 342 nt0.39□□□□□ -2.35
LSM6Q06406 MAM1YER106W 909 nt0.39□□□□□ -2.35
LSM6Q06406 tT(AGU)BtT(AGU)B 73 nt0.39□□□□□ -2.35
LSM6Q06406 tT(AGU)CtT(AGU)C 73 nt0.39□□□□□ -2.35
LSM6Q06406 tT(AGU)DtT(AGU)D 73 nt0.39□□□□□ -2.35
LSM6Q06406 tT(AGU)HtT(AGU)H 73 nt0.39□□□□□ -2.35
LSM6Q06406 tT(AGU)I1tT(AGU)I1 73 nt0.39□□□□□ -2.35
LSM6Q06406 tT(AGU)I2tT(AGU)I2 73 nt0.39□□□□□ -2.35
LSM6Q06406 tT(AGU)JtT(AGU)J 73 nt0.39□□□□□ -2.35
LSM6Q06406 tT(AGU)N1tT(AGU)N1 73 nt0.39□□□□□ -2.35
LSM6Q06406 tT(AGU)N2tT(AGU)N2 73 nt0.39□□□□□ -2.35
LSM6Q06406 tT(AGU)O1tT(AGU)O1 73 nt0.39□□□□□ -2.35
LSM6Q06406 tT(AGU)O2tT(AGU)O2 73 nt0.39□□□□□ -2.35
LSM6Q06406 PFS1YHR185C 714 nt0.39□□□□□ -2.35
LSM6Q06406 YMR178WYMR178W 825 nt0.39□□□□□ -2.35
LSM6Q06406 BRX1YOL077C 876 nt0.39□□□□□ -2.35
LSM6Q06406 YOL162WYOL162W 648 nt0.39□□□□□ -2.35
LSM6Q06406 NDD1YOR372C 1665 nt0.39□□□□□ -2.35
LSM6Q06406 CDC24YAL041W 2565 nt0.38□□□□□ -2.35
LSM6Q06406 SPT21YMR179W 2277 nt0.38□□□□□ -2.35
LSM6Q06406 NCS2YNL119W 1482 nt0.38□□□□□ -2.35
LSM6Q06406 snR57snR57 88 nt0.38□□□□□ -2.35
Retrieved 100 of 7,029 protein–RNA pairs in 20.1 ms