Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.73■□□□□ 0.91
NFKB1P19838 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NFKB1P19838 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
NFKB1P19838 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
NFKB1P19838 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NFKB1P19838 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NFKB1P19838 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
NFKB1P19838 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.72■□□□□ 0.91
NFKB1P19838 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NFKB1P19838 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NFKB1P19838 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NFKB1P19838 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
NFKB1P19838 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NFKB1P19838 AC004911.1-201ENST00000416316 871 ntBASIC20.72■□□□□ 0.91
NFKB1P19838 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.72■□□□□ 0.91
NFKB1P19838 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.72■□□□□ 0.91
NFKB1P19838 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.72■□□□□ 0.91
NFKB1P19838 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.72■□□□□ 0.91
NFKB1P19838 AC231657.2-201ENST00000624556 255 ntBASIC20.72■□□□□ 0.91
NFKB1P19838 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
NFKB1P19838 CYP21A1P-202ENST00000354927 1481 ntBASIC20.72■□□□□ 0.91
NFKB1P19838 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
NFKB1P19838 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NFKB1P19838 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NFKB1P19838 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NFKB1P19838 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.72■□□□□ 0.91
NFKB1P19838 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.72■□□□□ 0.91
NFKB1P19838 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.72■□□□□ 0.91
NFKB1P19838 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
NFKB1P19838 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.72■□□□□ 0.91
NFKB1P19838 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NFKB1P19838 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
NFKB1P19838 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.71■□□□□ 0.91
NFKB1P19838 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NFKB1P19838 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NFKB1P19838 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
NFKB1P19838 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NFKB1P19838 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.71■□□□□ 0.91
NFKB1P19838 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NFKB1P19838 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NFKB1P19838 AC007322.1-201ENST00000426983 750 ntBASIC20.71■□□□□ 0.91
NFKB1P19838 CYP2T1P-201ENST00000432607 1285 ntBASIC20.71■□□□□ 0.91
NFKB1P19838 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
NFKB1P19838 RARRES2P4-201ENST00000514074 484 ntBASIC20.71■□□□□ 0.91
NFKB1P19838 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.71■□□□□ 0.91
NFKB1P19838 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.71■□□□□ 0.91
NFKB1P19838 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NFKB1P19838 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NFKB1P19838 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NFKB1P19838 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NFKB1P19838 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NFKB1P19838 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
NFKB1P19838 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
NFKB1P19838 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NFKB1P19838 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.7■□□□□ 0.9
NFKB1P19838 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.7■□□□□ 0.9
NFKB1P19838 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
NFKB1P19838 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NFKB1P19838 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.7■□□□□ 0.9
NFKB1P19838 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NFKB1P19838 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NFKB1P19838 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.7■□□□□ 0.9
NFKB1P19838 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
NFKB1P19838 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NFKB1P19838 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.7■□□□□ 0.9
NFKB1P19838 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NFKB1P19838 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.7■□□□□ 0.9
NFKB1P19838 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.7■□□□□ 0.9
NFKB1P19838 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NFKB1P19838 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.7■□□□□ 0.9
NFKB1P19838 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.7■□□□□ 0.9
NFKB1P19838 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.7■□□□□ 0.9
NFKB1P19838 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NFKB1P19838 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
NFKB1P19838 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.7■□□□□ 0.9
NFKB1P19838 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
NFKB1P19838 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NFKB1P19838 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NFKB1P19838 AC087633.2-202ENST00000565166 1439 ntBASIC20.7■□□□□ 0.9
NFKB1P19838 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
NFKB1P19838 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.69■□□□□ 0.9
NFKB1P19838 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
NFKB1P19838 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NFKB1P19838 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NFKB1P19838 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NFKB1P19838 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NFKB1P19838 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NFKB1P19838 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NFKB1P19838 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
NFKB1P19838 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NFKB1P19838 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NFKB1P19838 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
NFKB1P19838 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.69■□□□□ 0.9
NFKB1P19838 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NFKB1P19838 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.69■□□□□ 0.9
NFKB1P19838 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
NFKB1P19838 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
NFKB1P19838 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.69■□□□□ 0.9
NFKB1P19838 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.69■□□□□ 0.9
NFKB1P19838 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms