Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
P01852 Gm10812-201ENSMUST00000099864 546 ntBASIC16.17■□□□□ 0.18
P01852 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
P01852 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
P01852 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
P01852 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
P01852 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
P01852 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
P01852 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
P01852 Tgds-204ENSMUST00000228543 1594 ntBASIC16.17■□□□□ 0.18
P01852 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
P01852 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
P01852 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
P01852 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
P01852 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
P01852 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
P01852 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
P01852 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
P01852 Gm15378-201ENSMUST00000121894 207 ntBASIC16.16■□□□□ 0.18
P01852 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC16.16■□□□□ 0.18
P01852 Mir6349-201ENSMUST00000184059 97 ntBASIC16.16■□□□□ 0.18
P01852 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC16.16■□□□□ 0.18
P01852 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.16■□□□□ 0.18
P01852 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
P01852 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
P01852 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
P01852 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
P01852 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
P01852 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
P01852 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
P01852 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
P01852 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
P01852 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
P01852 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
P01852 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC16.15■□□□□ 0.18
P01852 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
P01852 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC16.15■□□□□ 0.18
P01852 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC16.15■□□□□ 0.18
P01852 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
P01852 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
P01852 Gm15375-201ENSMUST00000119510 849 ntBASIC16.15■□□□□ 0.18
P01852 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
P01852 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
P01852 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC16.15■□□□□ 0.18
P01852 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
P01852 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
P01852 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
P01852 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
P01852 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
P01852 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
P01852 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
P01852 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
P01852 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.14■□□□□ 0.17
P01852 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
P01852 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.14■□□□□ 0.17
P01852 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC16.14■□□□□ 0.17
P01852 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC16.14■□□□□ 0.17
P01852 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
P01852 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
P01852 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC16.14■□□□□ 0.17
P01852 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.14■□□□□ 0.17
P01852 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
P01852 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
P01852 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
P01852 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
P01852 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
P01852 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
P01852 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
P01852 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
P01852 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
P01852 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
P01852 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
P01852 Gm10698-201ENSMUST00000182663 604 ntBASIC16.13■□□□□ 0.17
P01852 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
P01852 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
P01852 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
P01852 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
P01852 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
P01852 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
P01852 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
P01852 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
P01852 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
P01852 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
P01852 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
P01852 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
P01852 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC16.12■□□□□ 0.17
P01852 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
P01852 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
P01852 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
P01852 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
P01852 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
P01852 Gm45560-201ENSMUST00000211492 1472 ntBASIC16.11■□□□□ 0.17
P01852 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
P01852 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
P01852 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.11■□□□□ 0.17
P01852 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
P01852 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
P01852 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
P01852 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC16.11■□□□□ 0.17
P01852 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms