Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.7■□□□□ 0.91
PRAMEF11O60813 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
PRAMEF11O60813 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PRAMEF11O60813 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PRAMEF11O60813 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
PRAMEF11O60813 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
PRAMEF11O60813 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PRAMEF11O60813 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.7■□□□□ 0.9
PRAMEF11O60813 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.7■□□□□ 0.9
PRAMEF11O60813 DUSP5P2-201ENST00000426873 1033 ntBASIC20.7■□□□□ 0.9
PRAMEF11O60813 AC069152.1-201ENST00000438030 544 ntBASIC20.7■□□□□ 0.9
PRAMEF11O60813 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.7■□□□□ 0.9
PRAMEF11O60813 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.7■□□□□ 0.9
PRAMEF11O60813 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
PRAMEF11O60813 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.7■□□□□ 0.9
PRAMEF11O60813 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PRAMEF11O60813 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
PRAMEF11O60813 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.7■□□□□ 0.9
PRAMEF11O60813 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PRAMEF11O60813 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PRAMEF11O60813 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PRAMEF11O60813 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.7■□□□□ 0.9
PRAMEF11O60813 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PRAMEF11O60813 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PRAMEF11O60813 PKD1P6-201ENST00000343738 4769 ntBASIC20.7■□□□□ 0.9
PRAMEF11O60813 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.7■□□□□ 0.9
PRAMEF11O60813 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.7■□□□□ 0.9
PRAMEF11O60813 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
PRAMEF11O60813 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
PRAMEF11O60813 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRAMEF11O60813 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRAMEF11O60813 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRAMEF11O60813 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PRAMEF11O60813 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRAMEF11O60813 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRAMEF11O60813 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
PRAMEF11O60813 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.69■□□□□ 0.9
PRAMEF11O60813 AC091874.3-201ENST00000512672 1195 ntBASIC20.69■□□□□ 0.9
PRAMEF11O60813 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.69■□□□□ 0.9
PRAMEF11O60813 AC133041.1-202ENST00000642053 222 ntBASIC20.69■□□□□ 0.9
PRAMEF11O60813 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.69■□□□□ 0.9
PRAMEF11O60813 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRAMEF11O60813 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRAMEF11O60813 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PRAMEF11O60813 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PRAMEF11O60813 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRAMEF11O60813 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRAMEF11O60813 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRAMEF11O60813 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.69■□□□□ 0.9
PRAMEF11O60813 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.69■□□□□ 0.9
PRAMEF11O60813 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PRAMEF11O60813 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PRAMEF11O60813 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.68■□□□□ 0.9
PRAMEF11O60813 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PRAMEF11O60813 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.68■□□□□ 0.9
PRAMEF11O60813 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.68■□□□□ 0.9
PRAMEF11O60813 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.68■□□□□ 0.9
PRAMEF11O60813 C2orf69P4-201ENST00000565394 541 ntBASIC20.68■□□□□ 0.9
PRAMEF11O60813 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PRAMEF11O60813 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PRAMEF11O60813 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.68■□□□□ 0.9
PRAMEF11O60813 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PRAMEF11O60813 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PRAMEF11O60813 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PRAMEF11O60813 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PRAMEF11O60813 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PRAMEF11O60813 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.67■□□□□ 0.9
PRAMEF11O60813 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.67■□□□□ 0.9
PRAMEF11O60813 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PRAMEF11O60813 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PRAMEF11O60813 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
PRAMEF11O60813 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.67■□□□□ 0.9
PRAMEF11O60813 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.67■□□□□ 0.9
PRAMEF11O60813 MYC-209ENST00000641252 345 ntBASIC20.67■□□□□ 0.9
PRAMEF11O60813 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PRAMEF11O60813 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
PRAMEF11O60813 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.67■□□□□ 0.9
PRAMEF11O60813 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.67■□□□□ 0.9
PRAMEF11O60813 AC092720.2-201ENST00000602388 1665 ntBASIC20.67■□□□□ 0.9
PRAMEF11O60813 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.67■□□□□ 0.9
PRAMEF11O60813 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PRAMEF11O60813 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.66■□□□□ 0.9
PRAMEF11O60813 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.66■□□□□ 0.9
PRAMEF11O60813 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PRAMEF11O60813 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRAMEF11O60813 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRAMEF11O60813 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.66■□□□□ 0.9
PRAMEF11O60813 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRAMEF11O60813 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.66■□□□□ 0.9
PRAMEF11O60813 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.66■□□□□ 0.9
PRAMEF11O60813 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.66■□□□□ 0.9
PRAMEF11O60813 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.66■□□□□ 0.9
PRAMEF11O60813 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.66■□□□□ 0.9
PRAMEF11O60813 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRAMEF11O60813 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PRAMEF11O60813 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.66■□□□□ 0.9
PRAMEF11O60813 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.66■□□□□ 0.9
PRAMEF11O60813 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.66■□□□□ 0.9
PRAMEF11O60813 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.66■□□□□ 0.9
PRAMEF11O60813 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms