Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
KLHL41O60662 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
KLHL41O60662 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
KLHL41O60662 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.16■□□□□ 0.82
KLHL41O60662 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.16■□□□□ 0.82
KLHL41O60662 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.16■□□□□ 0.82
KLHL41O60662 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
KLHL41O60662 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.16■□□□□ 0.82
KLHL41O60662 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.16■□□□□ 0.82
KLHL41O60662 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
KLHL41O60662 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
KLHL41O60662 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
KLHL41O60662 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
KLHL41O60662 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
KLHL41O60662 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
KLHL41O60662 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
KLHL41O60662 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
KLHL41O60662 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
KLHL41O60662 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
KLHL41O60662 SMUG1P1-201ENST00000590640 811 ntBASIC20.15■□□□□ 0.82
KLHL41O60662 BID-214ENST00000617586 542 ntTSL 5 BASIC20.15■□□□□ 0.82
KLHL41O60662 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
KLHL41O60662 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.15■□□□□ 0.82
KLHL41O60662 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
KLHL41O60662 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
KLHL41O60662 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
KLHL41O60662 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
KLHL41O60662 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
KLHL41O60662 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
KLHL41O60662 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
KLHL41O60662 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
KLHL41O60662 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.15■□□□□ 0.82
KLHL41O60662 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
KLHL41O60662 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
KLHL41O60662 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
KLHL41O60662 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
KLHL41O60662 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
KLHL41O60662 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
KLHL41O60662 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
KLHL41O60662 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
KLHL41O60662 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.14■□□□□ 0.81
KLHL41O60662 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.14■□□□□ 0.81
KLHL41O60662 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.14■□□□□ 0.81
KLHL41O60662 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.14■□□□□ 0.81
KLHL41O60662 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.14■□□□□ 0.81
KLHL41O60662 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
KLHL41O60662 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.14■□□□□ 0.81
KLHL41O60662 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
KLHL41O60662 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.13■□□□□ 0.81
KLHL41O60662 AL162377.1-201ENST00000618844 1793 ntBASIC20.13■□□□□ 0.81
KLHL41O60662 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
KLHL41O60662 AP004607.4-201ENST00000530158 1459 ntBASIC20.13■□□□□ 0.81
KLHL41O60662 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
KLHL41O60662 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
KLHL41O60662 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
KLHL41O60662 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.13■□□□□ 0.81
KLHL41O60662 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
KLHL41O60662 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.13■□□□□ 0.81
KLHL41O60662 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.13■□□□□ 0.81
KLHL41O60662 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
KLHL41O60662 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.13■□□□□ 0.81
KLHL41O60662 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
KLHL41O60662 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
KLHL41O60662 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
KLHL41O60662 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.12■□□□□ 0.81
KLHL41O60662 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
KLHL41O60662 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.12■□□□□ 0.81
KLHL41O60662 AC079140.4-201ENST00000507448 529 ntBASIC20.12■□□□□ 0.81
KLHL41O60662 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.12■□□□□ 0.81
KLHL41O60662 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.12■□□□□ 0.81
KLHL41O60662 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.12■□□□□ 0.81
KLHL41O60662 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
KLHL41O60662 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
KLHL41O60662 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
KLHL41O60662 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
KLHL41O60662 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
KLHL41O60662 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.11■□□□□ 0.81
KLHL41O60662 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
KLHL41O60662 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
KLHL41O60662 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
KLHL41O60662 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
KLHL41O60662 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
KLHL41O60662 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
KLHL41O60662 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
KLHL41O60662 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.11■□□□□ 0.81
KLHL41O60662 AC026185.1-201ENST00000445748 174 ntBASIC20.11■□□□□ 0.81
KLHL41O60662 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.11■□□□□ 0.81
KLHL41O60662 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.11■□□□□ 0.81
KLHL41O60662 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
KLHL41O60662 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
KLHL41O60662 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.11■□□□□ 0.81
KLHL41O60662 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
KLHL41O60662 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
KLHL41O60662 AC099778.1-201ENST00000568593 1911 ntBASIC20.11■□□□□ 0.81
KLHL41O60662 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.11■□□□□ 0.81
KLHL41O60662 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
KLHL41O60662 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.11■□□□□ 0.81
KLHL41O60662 AC009237.3-201ENST00000393279 1427 ntBASIC20.1■□□□□ 0.81
KLHL41O60662 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
KLHL41O60662 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms