Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.36■□□□□ 0.37
TMEM235A6NFC5 AC018445.3-201ENST00000624177 1945 ntBASIC17.36■□□□□ 0.37
TMEM235A6NFC5 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM235A6NFC5 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.36■□□□□ 0.37
TMEM235A6NFC5 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM235A6NFC5 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM235A6NFC5 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM235A6NFC5 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM235A6NFC5 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.35■□□□□ 0.37
TMEM235A6NFC5 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM235A6NFC5 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM235A6NFC5 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM235A6NFC5 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM235A6NFC5 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM235A6NFC5 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM235A6NFC5 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
TMEM235A6NFC5 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM235A6NFC5 LHPP-203ENST00000392757 840 ntTSL 3 BASIC17.35■□□□□ 0.37
TMEM235A6NFC5 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC17.35■□□□□ 0.37
TMEM235A6NFC5 AICDA-202ENST00000537228 667 ntTSL 5 BASIC17.35■□□□□ 0.37
TMEM235A6NFC5 EEF1DP3-203ENST00000566025 782 ntBASIC17.35■□□□□ 0.37
TMEM235A6NFC5 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM235A6NFC5 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM235A6NFC5 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM235A6NFC5 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM235A6NFC5 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM235A6NFC5 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.35■□□□□ 0.37
TMEM235A6NFC5 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM235A6NFC5 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.35■□□□□ 0.37
TMEM235A6NFC5 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM235A6NFC5 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM235A6NFC5 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM235A6NFC5 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
TMEM235A6NFC5 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM235A6NFC5 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM235A6NFC5 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM235A6NFC5 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM235A6NFC5 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM235A6NFC5 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM235A6NFC5 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM235A6NFC5 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC17.34■□□□□ 0.37
TMEM235A6NFC5 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM235A6NFC5 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC17.34■□□□□ 0.37
TMEM235A6NFC5 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.34■□□□□ 0.37
TMEM235A6NFC5 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
TMEM235A6NFC5 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM235A6NFC5 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM235A6NFC5 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.34■□□□□ 0.37
TMEM235A6NFC5 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM235A6NFC5 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM235A6NFC5 AC053503.5-201ENST00000601508 636 ntBASIC17.34■□□□□ 0.37
TMEM235A6NFC5 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.34■□□□□ 0.37
TMEM235A6NFC5 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC17.34■□□□□ 0.37
TMEM235A6NFC5 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM235A6NFC5 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM235A6NFC5 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM235A6NFC5 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM235A6NFC5 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.33■□□□□ 0.37
TMEM235A6NFC5 AC098818.2-201ENST00000564925 2320 ntBASIC17.33■□□□□ 0.37
TMEM235A6NFC5 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TMEM235A6NFC5 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.33■□□□□ 0.37
TMEM235A6NFC5 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TMEM235A6NFC5 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
TMEM235A6NFC5 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TMEM235A6NFC5 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TMEM235A6NFC5 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TMEM235A6NFC5 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TMEM235A6NFC5 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
TMEM235A6NFC5 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
TMEM235A6NFC5 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
TMEM235A6NFC5 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC17.33■□□□□ 0.36
TMEM235A6NFC5 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC17.33■□□□□ 0.36
TMEM235A6NFC5 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.33■□□□□ 0.36
TMEM235A6NFC5 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TMEM235A6NFC5 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TMEM235A6NFC5 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.33■□□□□ 0.36
TMEM235A6NFC5 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
TMEM235A6NFC5 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TMEM235A6NFC5 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TMEM235A6NFC5 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
TMEM235A6NFC5 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
TMEM235A6NFC5 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.32■□□□□ 0.36
TMEM235A6NFC5 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
TMEM235A6NFC5 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM235A6NFC5 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM235A6NFC5 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM235A6NFC5 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM235A6NFC5 MFF-208ENST00000409616 1247 ntTSL 5 BASIC17.32■□□□□ 0.36
TMEM235A6NFC5 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC17.32■□□□□ 0.36
TMEM235A6NFC5 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC17.32■□□□□ 0.36
TMEM235A6NFC5 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM235A6NFC5 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC17.32■□□□□ 0.36
TMEM235A6NFC5 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM235A6NFC5 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM235A6NFC5 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.32■□□□□ 0.36
TMEM235A6NFC5 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
TMEM235A6NFC5 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM235A6NFC5 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.32■□□□□ 0.36
TMEM235A6NFC5 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
TMEM235A6NFC5 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms