Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATPAF2Q8N5M1 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATPAF2Q8N5M1 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATPAF2Q8N5M1 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.93■□□□□ 0.94
ATPAF2Q8N5M1 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
ATPAF2Q8N5M1 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.93■□□□□ 0.94
ATPAF2Q8N5M1 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
ATPAF2Q8N5M1 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
ATPAF2Q8N5M1 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATPAF2Q8N5M1 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATPAF2Q8N5M1 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
ATPAF2Q8N5M1 AL121603.2-201ENST00000557373 2117 ntBASIC20.92■□□□□ 0.94
ATPAF2Q8N5M1 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATPAF2Q8N5M1 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATPAF2Q8N5M1 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATPAF2Q8N5M1 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATPAF2Q8N5M1 PGM5P4-201ENST00000421970 445 ntBASIC20.92■□□□□ 0.94
ATPAF2Q8N5M1 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
ATPAF2Q8N5M1 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.92■□□□□ 0.94
ATPAF2Q8N5M1 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.92■□□□□ 0.94
ATPAF2Q8N5M1 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATPAF2Q8N5M1 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.92■□□□□ 0.94
ATPAF2Q8N5M1 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATPAF2Q8N5M1 RAP2CP1-201ENST00000605103 478 ntBASIC20.92■□□□□ 0.94
ATPAF2Q8N5M1 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.92■□□□□ 0.94
ATPAF2Q8N5M1 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
ATPAF2Q8N5M1 CYP21A1P-202ENST00000354927 1481 ntBASIC20.92■□□□□ 0.94
ATPAF2Q8N5M1 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATPAF2Q8N5M1 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ATPAF2Q8N5M1 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.92■□□□□ 0.94
ATPAF2Q8N5M1 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATPAF2Q8N5M1 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
ATPAF2Q8N5M1 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
ATPAF2Q8N5M1 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.92■□□□□ 0.94
ATPAF2Q8N5M1 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.92■□□□□ 0.94
ATPAF2Q8N5M1 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATPAF2Q8N5M1 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATPAF2Q8N5M1 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATPAF2Q8N5M1 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.91■□□□□ 0.94
ATPAF2Q8N5M1 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.91■□□□□ 0.94
ATPAF2Q8N5M1 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATPAF2Q8N5M1 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
ATPAF2Q8N5M1 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ATPAF2Q8N5M1 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.91■□□□□ 0.94
ATPAF2Q8N5M1 OR10C1-204ENST00000622521 1039 ntBASIC20.91■□□□□ 0.94
ATPAF2Q8N5M1 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATPAF2Q8N5M1 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
ATPAF2Q8N5M1 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.9■□□□□ 0.94
ATPAF2Q8N5M1 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ATPAF2Q8N5M1 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATPAF2Q8N5M1 FEM1AP1-201ENST00000431297 1995 ntBASIC20.9■□□□□ 0.94
ATPAF2Q8N5M1 AC087633.2-202ENST00000565166 1439 ntBASIC20.9■□□□□ 0.94
ATPAF2Q8N5M1 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATPAF2Q8N5M1 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.9■□□□□ 0.94
ATPAF2Q8N5M1 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.9■□□□□ 0.94
ATPAF2Q8N5M1 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.9■□□□□ 0.94
ATPAF2Q8N5M1 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ATPAF2Q8N5M1 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATPAF2Q8N5M1 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.9■□□□□ 0.94
ATPAF2Q8N5M1 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
ATPAF2Q8N5M1 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.9■□□□□ 0.94
ATPAF2Q8N5M1 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATPAF2Q8N5M1 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATPAF2Q8N5M1 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATPAF2Q8N5M1 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.89■□□□□ 0.94
ATPAF2Q8N5M1 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
ATPAF2Q8N5M1 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
ATPAF2Q8N5M1 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.89■□□□□ 0.93
ATPAF2Q8N5M1 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATPAF2Q8N5M1 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ATPAF2Q8N5M1 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
ATPAF2Q8N5M1 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
ATPAF2Q8N5M1 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.89■□□□□ 0.93
ATPAF2Q8N5M1 AC100791.3-201ENST00000617619 330 ntBASIC20.89■□□□□ 0.93
ATPAF2Q8N5M1 AL157384.1-201ENST00000445995 2473 ntBASIC20.89■□□□□ 0.93
ATPAF2Q8N5M1 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.89■□□□□ 0.93
ATPAF2Q8N5M1 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.89■□□□□ 0.93
ATPAF2Q8N5M1 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.89■□□□□ 0.93
ATPAF2Q8N5M1 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATPAF2Q8N5M1 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATPAF2Q8N5M1 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
ATPAF2Q8N5M1 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATPAF2Q8N5M1 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATPAF2Q8N5M1 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.88■□□□□ 0.93
ATPAF2Q8N5M1 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ATPAF2Q8N5M1 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.88■□□□□ 0.93
ATPAF2Q8N5M1 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATPAF2Q8N5M1 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATPAF2Q8N5M1 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATPAF2Q8N5M1 AC073314.1-201ENST00000568729 2216 ntBASIC20.88■□□□□ 0.93
ATPAF2Q8N5M1 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
ATPAF2Q8N5M1 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATPAF2Q8N5M1 MCRIP2P1-201ENST00000394346 511 ntBASIC20.88■□□□□ 0.93
ATPAF2Q8N5M1 CROCCP5-201ENST00000436658 830 ntBASIC20.88■□□□□ 0.93
ATPAF2Q8N5M1 AC006970.2-201ENST00000450065 779 ntBASIC20.88■□□□□ 0.93
ATPAF2Q8N5M1 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.88■□□□□ 0.93
ATPAF2Q8N5M1 AL050303.2-201ENST00000619798 666 ntBASIC20.88■□□□□ 0.93
ATPAF2Q8N5M1 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATPAF2Q8N5M1 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.88■□□□□ 0.93
ATPAF2Q8N5M1 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms