Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
SIX5Q8N196 AL390719.1-204ENST00000412397 1219 ntBASIC20.95■□□□□ 0.94
SIX5Q8N196 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC20.95■□□□□ 0.94
SIX5Q8N196 AL355355.2-201ENST00000442321 338 ntBASIC20.95■□□□□ 0.94
SIX5Q8N196 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.95■□□□□ 0.94
SIX5Q8N196 AC079834.2-201ENST00000609776 1949 ntBASIC20.95■□□□□ 0.94
SIX5Q8N196 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SIX5Q8N196 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC20.95■□□□□ 0.94
SIX5Q8N196 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SIX5Q8N196 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SIX5Q8N196 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SIX5Q8N196 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
SIX5Q8N196 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SIX5Q8N196 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SIX5Q8N196 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SIX5Q8N196 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
SIX5Q8N196 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SIX5Q8N196 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.95■□□□□ 0.94
SIX5Q8N196 AC116050.2-201ENST00000612102 1779 ntBASIC20.95■□□□□ 0.94
SIX5Q8N196 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SIX5Q8N196 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.94■□□□□ 0.94
SIX5Q8N196 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SIX5Q8N196 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.94■□□□□ 0.94
SIX5Q8N196 AC026471.6-201ENST00000622954 1905 ntBASIC20.94■□□□□ 0.94
SIX5Q8N196 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.94■□□□□ 0.94
SIX5Q8N196 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SIX5Q8N196 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC20.94■□□□□ 0.94
SIX5Q8N196 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.94■□□□□ 0.94
SIX5Q8N196 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.94■□□□□ 0.94
SIX5Q8N196 AC092865.7-201ENST00000641832 219 ntBASIC20.94■□□□□ 0.94
SIX5Q8N196 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
SIX5Q8N196 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SIX5Q8N196 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SIX5Q8N196 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SIX5Q8N196 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SIX5Q8N196 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SIX5Q8N196 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SIX5Q8N196 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.94■□□□□ 0.94
SIX5Q8N196 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
SIX5Q8N196 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SIX5Q8N196 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.93■□□□□ 0.94
SIX5Q8N196 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SIX5Q8N196 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
SIX5Q8N196 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.93■□□□□ 0.94
SIX5Q8N196 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SIX5Q8N196 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SIX5Q8N196 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.93■□□□□ 0.94
SIX5Q8N196 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.93■□□□□ 0.94
SIX5Q8N196 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.93■□□□□ 0.94
SIX5Q8N196 RMI2-205ENST00000576027 818 ntTSL 2 BASIC20.93■□□□□ 0.94
SIX5Q8N196 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.93■□□□□ 0.94
SIX5Q8N196 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
SIX5Q8N196 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SIX5Q8N196 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.92■□□□□ 0.94
SIX5Q8N196 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SIX5Q8N196 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.92■□□□□ 0.94
SIX5Q8N196 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SIX5Q8N196 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.92■□□□□ 0.94
SIX5Q8N196 AC068473.5-201ENST00000616428 2072 ntBASIC20.92■□□□□ 0.94
SIX5Q8N196 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
SIX5Q8N196 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SIX5Q8N196 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
SIX5Q8N196 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SIX5Q8N196 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.92■□□□□ 0.94
SIX5Q8N196 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.92■□□□□ 0.94
SIX5Q8N196 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.92■□□□□ 0.94
SIX5Q8N196 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.92■□□□□ 0.94
SIX5Q8N196 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
SIX5Q8N196 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.92■□□□□ 0.94
SIX5Q8N196 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SIX5Q8N196 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.92■□□□□ 0.94
SIX5Q8N196 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
SIX5Q8N196 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.92■□□□□ 0.94
SIX5Q8N196 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.92■□□□□ 0.94
SIX5Q8N196 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SIX5Q8N196 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SIX5Q8N196 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SIX5Q8N196 AC010542.4-201ENST00000563151 1910 ntBASIC20.92■□□□□ 0.94
SIX5Q8N196 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SIX5Q8N196 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
SIX5Q8N196 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SIX5Q8N196 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
SIX5Q8N196 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SIX5Q8N196 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.91■□□□□ 0.94
SIX5Q8N196 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.91■□□□□ 0.94
SIX5Q8N196 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
SIX5Q8N196 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.91■□□□□ 0.94
SIX5Q8N196 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.91■□□□□ 0.94
SIX5Q8N196 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.91■□□□□ 0.94
SIX5Q8N196 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SIX5Q8N196 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.91■□□□□ 0.94
SIX5Q8N196 AC087633.2-202ENST00000565166 1439 ntBASIC20.91■□□□□ 0.94
SIX5Q8N196 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.91■□□□□ 0.94
SIX5Q8N196 MIR6786-201ENST00000616843 113 ntBASIC20.91■□□□□ 0.94
SIX5Q8N196 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
SIX5Q8N196 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
SIX5Q8N196 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SIX5Q8N196 AC012676.1-201ENST00000574705 1949 ntBASIC20.9■□□□□ 0.94
SIX5Q8N196 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.9■□□□□ 0.94
SIX5Q8N196 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms