Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC22.66■■□□□ 1.22
CCDC65Q8IXS2 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC22.66■■□□□ 1.22
CCDC65Q8IXS2 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC22.66■■□□□ 1.22
CCDC65Q8IXS2 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
CCDC65Q8IXS2 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CCDC65Q8IXS2 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CCDC65Q8IXS2 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CCDC65Q8IXS2 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC22.66■■□□□ 1.22
CCDC65Q8IXS2 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC22.66■■□□□ 1.22
CCDC65Q8IXS2 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC22.66■■□□□ 1.22
CCDC65Q8IXS2 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CCDC65Q8IXS2 PARP1-210ENST00000629232 477 ntTSL 5 BASIC22.66■■□□□ 1.22
CCDC65Q8IXS2 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC22.66■■□□□ 1.22
CCDC65Q8IXS2 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC22.66■■□□□ 1.22
CCDC65Q8IXS2 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC22.66■■□□□ 1.22
CCDC65Q8IXS2 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CCDC65Q8IXS2 AC020907.5-201ENST00000624372 1936 ntBASIC22.66■■□□□ 1.22
CCDC65Q8IXS2 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
CCDC65Q8IXS2 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CCDC65Q8IXS2 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
CCDC65Q8IXS2 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
CCDC65Q8IXS2 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CCDC65Q8IXS2 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC22.65■■□□□ 1.22
CCDC65Q8IXS2 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
CCDC65Q8IXS2 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CCDC65Q8IXS2 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CCDC65Q8IXS2 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC22.65■■□□□ 1.22
CCDC65Q8IXS2 RARRES2P4-201ENST00000514074 484 ntBASIC22.65■■□□□ 1.22
CCDC65Q8IXS2 AL137784.2-201ENST00000607332 1000 ntBASIC22.65■■□□□ 1.22
CCDC65Q8IXS2 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC22.65■■□□□ 1.22
CCDC65Q8IXS2 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC22.65■■□□□ 1.22
CCDC65Q8IXS2 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC22.65■■□□□ 1.22
CCDC65Q8IXS2 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
CCDC65Q8IXS2 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
CCDC65Q8IXS2 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
CCDC65Q8IXS2 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
CCDC65Q8IXS2 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.22
CCDC65Q8IXS2 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC22.64■■□□□ 1.22
CCDC65Q8IXS2 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
CCDC65Q8IXS2 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC22.64■■□□□ 1.21
CCDC65Q8IXS2 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CCDC65Q8IXS2 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC22.64■■□□□ 1.21
CCDC65Q8IXS2 BET1L-204ENST00000410108 637 ntTSL 3 BASIC22.64■■□□□ 1.21
CCDC65Q8IXS2 AC004911.1-201ENST00000416316 871 ntBASIC22.64■■□□□ 1.21
CCDC65Q8IXS2 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC22.64■■□□□ 1.21
CCDC65Q8IXS2 PGM5P4-201ENST00000421970 445 ntBASIC22.64■■□□□ 1.21
CCDC65Q8IXS2 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC22.64■■□□□ 1.21
CCDC65Q8IXS2 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CCDC65Q8IXS2 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC22.64■■□□□ 1.21
CCDC65Q8IXS2 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
CCDC65Q8IXS2 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
CCDC65Q8IXS2 AC092720.2-201ENST00000602388 1665 ntBASIC22.64■■□□□ 1.21
CCDC65Q8IXS2 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CCDC65Q8IXS2 KRT8P36-201ENST00000489121 1440 ntBASIC22.64■■□□□ 1.21
CCDC65Q8IXS2 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CCDC65Q8IXS2 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CCDC65Q8IXS2 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC22.64■■□□□ 1.21
CCDC65Q8IXS2 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CCDC65Q8IXS2 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC22.63■■□□□ 1.21
CCDC65Q8IXS2 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CCDC65Q8IXS2 AC092667.1-201ENST00000434301 2586 ntBASIC22.63■■□□□ 1.21
CCDC65Q8IXS2 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CCDC65Q8IXS2 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CCDC65Q8IXS2 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
CCDC65Q8IXS2 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CCDC65Q8IXS2 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CCDC65Q8IXS2 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC22.63■■□□□ 1.21
CCDC65Q8IXS2 AC080038.1-201ENST00000611274 1154 ntBASIC22.63■■□□□ 1.21
CCDC65Q8IXS2 MAZ-216ENST00000616501 991 ntTSL 5 BASIC22.63■■□□□ 1.21
CCDC65Q8IXS2 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
CCDC65Q8IXS2 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC22.63■■□□□ 1.21
CCDC65Q8IXS2 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC22.63■■□□□ 1.21
CCDC65Q8IXS2 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC22.63■■□□□ 1.21
CCDC65Q8IXS2 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC22.63■■□□□ 1.21
CCDC65Q8IXS2 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CCDC65Q8IXS2 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
CCDC65Q8IXS2 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CCDC65Q8IXS2 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CCDC65Q8IXS2 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC22.62■■□□□ 1.21
CCDC65Q8IXS2 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CCDC65Q8IXS2 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC22.62■■□□□ 1.21
CCDC65Q8IXS2 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CCDC65Q8IXS2 CYP21A1P-202ENST00000354927 1481 ntBASIC22.62■■□□□ 1.21
CCDC65Q8IXS2 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CCDC65Q8IXS2 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC22.62■■□□□ 1.21
CCDC65Q8IXS2 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC22.62■■□□□ 1.21
CCDC65Q8IXS2 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CCDC65Q8IXS2 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
CCDC65Q8IXS2 CYP2T1P-201ENST00000432607 1285 ntBASIC22.62■■□□□ 1.21
CCDC65Q8IXS2 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CCDC65Q8IXS2 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CCDC65Q8IXS2 AC069236.1-201ENST00000604339 616 ntBASIC22.62■■□□□ 1.21
CCDC65Q8IXS2 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
CCDC65Q8IXS2 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC22.62■■□□□ 1.21
CCDC65Q8IXS2 AC087633.2-202ENST00000565166 1439 ntBASIC22.62■■□□□ 1.21
CCDC65Q8IXS2 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
CCDC65Q8IXS2 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
CCDC65Q8IXS2 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CCDC65Q8IXS2 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC22.61■■□□□ 1.21
CCDC65Q8IXS2 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC22.61■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms