Protein–RNA interactions for Protein: Q07878

VPS13, Vacuolar protein sorting-associated protein 13, yeastyeast

Predictions only

Length 3,144 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS13Q07878 YFR045WYFR045W 930 nt-0.02□□□□□ -2.41
VPS13Q07878 CYB5YNL111C 363 nt-0.02□□□□□ -2.41
VPS13Q07878 MGR1YCL044C 1254 nt-0.02□□□□□ -2.41
VPS13Q07878 SLK19YOR195W 2466 nt-0.02□□□□□ -2.41
VPS13Q07878 BTT1YDR252W 450 nt-0.02□□□□□ -2.41
VPS13Q07878 RPL1BYGL135W 654 nt-0.02□□□□□ -2.41
VPS13Q07878 RPL1AYPL220W 654 nt-0.02□□□□□ -2.41
VPS13Q07878 snR190snR190 190 nt-0.02□□□□□ -2.41
VPS13Q07878 FUS2YMR232W 2034 nt-0.03□□□□□ -2.41
VPS13Q07878 TIM13YGR181W 318 nt-0.03□□□□□ -2.41
VPS13Q07878 LTO1YNL260C 597 nt-0.03□□□□□ -2.41
VPS13Q07878 UTP10YJL109C 5310 nt-0.03□□□□□ -2.41
VPS13Q07878 PBP4YDL053C 558 nt-0.03□□□□□ -2.41
VPS13Q07878 MPD1YOR288C 957 nt-0.03□□□□□ -2.41
VPS13Q07878 CIC1YHR052W 1131 nt-0.04□□□□□ -2.42
VPS13Q07878 HYR1YIR037W 492 nt-0.04□□□□□ -2.42
VPS13Q07878 YLR307C-AYLR307C-A 264 nt-0.04□□□□□ -2.42
VPS13Q07878 YPR063CYPR063C 423 nt-0.04□□□□□ -2.42
VPS13Q07878 YCR038W-AYCR038W-A 126 nt-0.04□□□□□ -2.42
VPS13Q07878 YGL039WYGL039W 1047 nt-0.04□□□□□ -2.42
VPS13Q07878 MCM10YIL150C 1716 nt-0.04□□□□□ -2.42
VPS13Q07878 YMR052C-AYMR052C-A 366 nt-0.04□□□□□ -2.42
VPS13Q07878 IST1YNL265C 897 nt-0.05□□□□□ -2.42
VPS13Q07878 MPS1YDL028C 2295 nt-0.05□□□□□ -2.42
VPS13Q07878 ANR2YKL047W 1551 nt-0.05□□□□□ -2.42
VPS13Q07878 RPL35BYDL136W 363 nt-0.05□□□□□ -2.42
VPS13Q07878 RPL35AYDL191W 363 nt-0.05□□□□□ -2.42
VPS13Q07878 YIL141WYIL141W 390 nt-0.05□□□□□ -2.42
VPS13Q07878 YOR161W-BYOR161W-B 261 nt-0.05□□□□□ -2.42
VPS13Q07878 YFL012W-AYFL012W-A 375 nt-0.06□□□□□ -2.42
VPS13Q07878 YPL135C-AYPL135C-A 174 nt-0.06□□□□□ -2.42
VPS13Q07878 BNA7YDR428C 786 nt-0.06□□□□□ -2.42
VPS13Q07878 YPL034WYPL034W 498 nt-0.06□□□□□ -2.42
VPS13Q07878 RPL40AYIL148W 387 nt-0.07□□□□□ -2.42
VPS13Q07878 SNX4YJL036W 1272 nt-0.08□□□□□ -2.42
VPS13Q07878 TRM12YML005W 1389 nt-0.08□□□□□ -2.42
VPS13Q07878 PRK1YIL095W 2433 nt-0.08□□□□□ -2.42
VPS13Q07878 RPL37AYLR185W 267 nt-0.08□□□□□ -2.42
VPS13Q07878 YCL001W-AYCL001W-A 462 nt-0.08□□□□□ -2.42
VPS13Q07878 YGR050CYGR050C 357 nt-0.09□□□□□ -2.42
VPS13Q07878 COX5BYIL111W 456 nt-0.09□□□□□ -2.42
VPS13Q07878 ABF2YMR072W 552 nt-0.09□□□□□ -2.42
VPS13Q07878 NUP188YML103C 4968 nt-0.09□□□□□ -2.42
VPS13Q07878 APC2YLR127C 2562 nt-0.09□□□□□ -2.42
VPS13Q07878 MKT1YNL085W 2493 nt-0.09□□□□□ -2.42
VPS13Q07878 CLC1YGR167W 702 nt-0.1□□□□□ -2.43
VPS13Q07878 TEN1YLR010C 483 nt-0.1□□□□□ -2.43
VPS13Q07878 BAG7YOR134W 1230 nt-0.1□□□□□ -2.43
VPS13Q07878 AIM41YOR215C 558 nt-0.1□□□□□ -2.43
VPS13Q07878 ATG5YPL149W 885 nt-0.1□□□□□ -2.43
VPS13Q07878 YDL186WYDL186W 834 nt-0.1□□□□□ -2.43
VPS13Q07878 YMR320WYMR320W 306 nt-0.1□□□□□ -2.43
VPS13Q07878 NOP9YJL010C 2001 nt-0.1□□□□□ -2.43
VPS13Q07878 PEX12YMR026C 1200 nt-0.11□□□□□ -2.43
VPS13Q07878 IES4YOR189W 351 nt-0.11□□□□□ -2.43
VPS13Q07878 NPC2YDL046W 522 nt-0.11□□□□□ -2.43
VPS13Q07878 MSA2YKR077W 1092 nt-0.11□□□□□ -2.43
VPS13Q07878 YGR149WYGR149W 1299 nt-0.11□□□□□ -2.43
VPS13Q07878 YGR026WYGR026W 837 nt-0.12□□□□□ -2.43
VPS13Q07878 YLR379WYLR379W 375 nt-0.12□□□□□ -2.43
VPS13Q07878 HHT2YNL031C 411 nt-0.12□□□□□ -2.43
VPS13Q07878 SKO1YNL167C 1944 nt-0.12□□□□□ -2.43
VPS13Q07878 RGI2YIL057C 495 nt-0.12□□□□□ -2.43
VPS13Q07878 YDR018CYDR018C 1191 nt-0.13□□□□□ -2.43
VPS13Q07878 YKL162CYKL162C 1209 nt-0.13□□□□□ -2.43
VPS13Q07878 INA17YPL099C 549 nt-0.13□□□□□ -2.43
VPS13Q07878 PDE2YOR360C 1581 nt-0.14□□□□□ -2.43
VPS13Q07878 ECM18YDR125C 1362 nt-0.14□□□□□ -2.43
VPS13Q07878 ECM11YDR446W 909 nt-0.14□□□□□ -2.43
VPS13Q07878 YKL111CYKL111C 336 nt-0.14□□□□□ -2.43
VPS13Q07878 SPC2YML055W 537 nt-0.14□□□□□ -2.43
VPS13Q07878 DAS2YDR020C 699 nt-0.15□□□□□ -2.43
VPS13Q07878 DSE2YHR143W 978 nt-0.15□□□□□ -2.43
VPS13Q07878 YOL166W-AYOL166W-A 156 nt-0.15□□□□□ -2.43
VPS13Q07878 ESP1YGR098C 4893 nt-0.15□□□□□ -2.43
VPS13Q07878 YAL064WYAL064W 285 nt-0.15□□□□□ -2.43
VPS13Q07878 SWF1YDR126W 1011 nt-0.16□□□□□ -2.43
VPS13Q07878 YLR290CYLR290C 834 nt-0.16□□□□□ -2.43
VPS13Q07878 REF2YDR195W 1602 nt-0.16□□□□□ -2.43
VPS13Q07878 ATP16YDL004W 483 nt-0.16□□□□□ -2.43
VPS13Q07878 YPR170W-AYPR170W-A 186 nt-0.16□□□□□ -2.43
VPS13Q07878 YPR172WYPR172W 603 nt-0.16□□□□□ -2.43
VPS13Q07878 SPT21YMR179W 2277 nt-0.16□□□□□ -2.44
VPS13Q07878 NIP100YPL174C 2607 nt-0.16□□□□□ -2.44
VPS13Q07878 TIM21YGR033C 720 nt-0.16□□□□□ -2.44
VPS13Q07878 HAL9YOL089C 3093 nt-0.16□□□□□ -2.44
VPS13Q07878 MEI4YER044C-A 1227 nt-0.17□□□□□ -2.44
VPS13Q07878 YLR225CYLR225C 1224 nt-0.17□□□□□ -2.44
VPS13Q07878 NDD1YOR372C 1665 nt-0.17□□□□□ -2.44
VPS13Q07878 YDR210WYDR210W 228 nt-0.17□□□□□ -2.44
VPS13Q07878 BSC2YDR275W 708 nt-0.17□□□□□ -2.44
VPS13Q07878 YJL202CYJL202C 348 nt-0.17□□□□□ -2.44
VPS13Q07878 YKL183C-AYKL183C-A 213 nt-0.17□□□□□ -2.44
VPS13Q07878 RRP6YOR001W 2202 nt-0.18□□□□□ -2.44
VPS13Q07878 YIL086CYIL086C 309 nt-0.18□□□□□ -2.44
VPS13Q07878 YML084WYML084W 309 nt-0.18□□□□□ -2.44
VPS13Q07878 YMR144WYMR144W 1029 nt-0.18□□□□□ -2.44
VPS13Q07878 MPT5YGL178W 2580 nt-0.18□□□□□ -2.44
VPS13Q07878 YDL050CYDL050C 372 nt-0.18□□□□□ -2.44
VPS13Q07878 TEX1YNL253W 1269 nt-0.18□□□□□ -2.44
Retrieved 100 of 7,029 protein–RNA pairs in 78.7 ms