Protein–RNA interactions for Protein: Q04673

SSL1, General transcription and DNA repair factor IIH subunit SSL1, yeastyeast

Predicted RBP Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSL1Q04673 VPS52YDR484W 1926 nt3.16□□□□□ -1.9
SSL1Q04673 REV1YOR346W 2958 nt3.16□□□□□ -1.9
SSL1Q04673 NAB6YML117W 3405 nt3.16□□□□□ -1.9
SSL1Q04673 BRO1YPL084W 2535 nt3.16□□□□□ -1.9
SSL1Q04673 FUS1YCL027W 1539 nt3.15□□□□□ -1.9
SSL1Q04673 WIP1YDR374W-A 270 nt3.15□□□□□ -1.91
SSL1Q04673 CYC7YEL039C 342 nt3.15□□□□□ -1.91
SSL1Q04673 YGL149WYGL149W 306 nt3.15□□□□□ -1.91
SSL1Q04673 NCE101YJL205C 162 nt3.15□□□□□ -1.91
SSL1Q04673 RPS18BYML026C 441 nt3.15□□□□□ -1.91
SSL1Q04673 NUP82YJL061W 2142 nt3.14□□□□□ -1.91
SSL1Q04673 EPL1YFL024C 2499 nt3.14□□□□□ -1.91
SSL1Q04673 YEL025CYEL025C 3567 nt3.14□□□□□ -1.91
SSL1Q04673 YDL041WYDL041W 354 nt3.14□□□□□ -1.91
SSL1Q04673 DAD4YDR320C-A 219 nt3.14□□□□□ -1.91
SSL1Q04673 YMR31YFR049W 372 nt3.14□□□□□ -1.91
SSL1Q04673 YGR174W-AYGR174W-A 87 nt3.14□□□□□ -1.91
SSL1Q04673 YPL182CYPL182C 384 nt3.14□□□□□ -1.91
SSL1Q04673 MTR4YJL050W 3222 nt3.14□□□□□ -1.91
SSL1Q04673 PRK1YIL095W 2433 nt3.14□□□□□ -1.91
SSL1Q04673 VTC4YJL012C 2166 nt3.14□□□□□ -1.91
SSL1Q04673 STT4YLR305C 5703 nt3.13□□□□□ -1.91
SSL1Q04673 FAR1YJL157C 2493 nt3.13□□□□□ -1.91
SSL1Q04673 RCY1YJL204C 2523 nt3.13□□□□□ -1.91
SSL1Q04673 YKL033W-AYKL033W-A 711 nt3.13□□□□□ -1.91
SSL1Q04673 RPS21AYKR057W 264 nt3.13□□□□□ -1.91
SSL1Q04673 TAR1YLR154W-C 375 nt3.13□□□□□ -1.91
SSL1Q04673 YMR046W-AYMR046W-A 129 nt3.13□□□□□ -1.91
SSL1Q04673 ROM1YGR070W 3468 nt3.13□□□□□ -1.91
SSL1Q04673 MIT1YEL007W 2001 nt3.13□□□□□ -1.91
SSL1Q04673 TOM70YNL121C 1854 nt3.13□□□□□ -1.91
SSL1Q04673 YSP2YDR326C 4317 nt3.13□□□□□ -1.91
SSL1Q04673 LYS9YNR050C 1341 nt3.13□□□□□ -1.91
SSL1Q04673 MET10YFR030W 3108 nt3.13□□□□□ -1.91
SSL1Q04673 ECM25YJL201W 1800 nt3.12□□□□□ -1.91
SSL1Q04673 tF(GAA)DtF(GAA)D 73 nt3.12□□□□□ -1.91
SSL1Q04673 tF(GAA)NtF(GAA)N 73 nt3.12□□□□□ -1.91
SSL1Q04673 snR42snR42 351 nt3.12□□□□□ -1.91
SSL1Q04673 IRC10YOL015W 1761 nt3.12□□□□□ -1.91
SSL1Q04673 SNT1YCR033W 3681 nt3.12□□□□□ -1.91
SSL1Q04673 YMR317WYMR317W 3423 nt3.11□□□□□ -1.91
SSL1Q04673 MZM1YDR493W 372 nt3.11□□□□□ -1.91
SSL1Q04673 AST2YER101C 1293 nt3.11□□□□□ -1.91
SSL1Q04673 YGL188C-AYGL188C-A 141 nt3.11□□□□□ -1.91
SSL1Q04673 HSK3YKL138C-A 210 nt3.11□□□□□ -1.91
SSL1Q04673 YKR033CYKR033C 426 nt3.11□□□□□ -1.91
SSL1Q04673 TMA10YLR327C 261 nt3.11□□□□□ -1.91
SSL1Q04673 RPL20BYOR312C 519 nt3.11□□□□□ -1.91
SSL1Q04673 TSC11YER093C 4293 nt3.11□□□□□ -1.91
SSL1Q04673 BNA4YBL098W 1383 nt3.11□□□□□ -1.91
SSL1Q04673 SPO71YDR104C 3738 nt3.1□□□□□ -1.91
SSL1Q04673 RLF2YPR018W 1821 nt3.1□□□□□ -1.91
SSL1Q04673 YGL007C-AYGL007C-A 87 nt3.1□□□□□ -1.91
SSL1Q04673 YLR012CYLR012C 300 nt3.1□□□□□ -1.91
SSL1Q04673 ATP15YPL271W 189 nt3.1□□□□□ -1.91
SSL1Q04673 YPR099CYPR099C 357 nt3.1□□□□□ -1.91
SSL1Q04673 YJL181WYJL181W 1836 nt3.09□□□□□ -1.91
SSL1Q04673 AIM9YER080W 1884 nt3.09□□□□□ -1.91
SSL1Q04673 OSW7YFR039C 1533 nt3.09□□□□□ -1.91
SSL1Q04673 DBP10YDL031W 2988 nt3.09□□□□□ -1.91
SSL1Q04673 YER079C-AYER079C-A 339 nt3.09□□□□□ -1.91
SSL1Q04673 RPL14BYHL001W 417 nt3.09□□□□□ -1.91
SSL1Q04673 CCW14YLR390W-A 717 nt3.09□□□□□ -1.91
SSL1Q04673 HCH1YNL281W 462 nt3.09□□□□□ -1.91
SSL1Q04673 MGR1YCL044C 1254 nt3.09□□□□□ -1.91
SSL1Q04673 OSH6YKR003W 1347 nt3.09□□□□□ -1.91
SSL1Q04673 RPA190YOR341W 4995 nt3.09□□□□□ -1.92
SSL1Q04673 CAF120YNL278W 3183 nt3.09□□□□□ -1.92
SSL1Q04673 BOI1YBL085W 2943 nt3.09□□□□□ -1.92
SSL1Q04673 SPB1YCL054W 2526 nt3.09□□□□□ -1.92
SSL1Q04673 YTA7YGR270W 4140 nt3.08□□□□□ -1.92
SSL1Q04673 snR79snR79 84 nt3.08□□□□□ -1.92
SSL1Q04673 YDR406W-AYDR406W-A 246 nt3.08□□□□□ -1.92
SSL1Q04673 RPS24AYER074W 408 nt3.08□□□□□ -1.92
SSL1Q04673 RPL8BYLL045C 771 nt3.08□□□□□ -1.92
SSL1Q04673 DIA2YOR080W 2199 nt3.08□□□□□ -1.92
SSL1Q04673 YIL166CYIL166C 1629 nt3.08□□□□□ -1.92
SSL1Q04673 CHO2YGR157W 2610 nt3.07□□□□□ -1.92
SSL1Q04673 SSE1YPL106C 2082 nt3.07□□□□□ -1.92
SSL1Q04673 BUD4YJR092W 4344 nt3.07□□□□□ -1.92
SSL1Q04673 GYP7YDL234C 2241 nt3.07□□□□□ -1.92
SSL1Q04673 YDR344CYDR344C 444 nt3.07□□□□□ -1.92
SSL1Q04673 YOR072W-AYOR072W-A 249 nt3.07□□□□□ -1.92
SSL1Q04673 SOK1YDR006C 2706 nt3.07□□□□□ -1.92
SSL1Q04673 SGO1YOR073W 1773 nt3.07□□□□□ -1.92
SSL1Q04673 NTO1YPR031W 2247 nt3.07□□□□□ -1.92
SSL1Q04673 STE23YLR389C 3084 nt3.06□□□□□ -1.92
SSL1Q04673 YJL020W-AYJL020W-A 258 nt3.06□□□□□ -1.92
SSL1Q04673 CDC24YAL041W 2565 nt3.06□□□□□ -1.92
SSL1Q04673 YOR050CYOR050C 348 nt3.06□□□□□ -1.92
SSL1Q04673 APC2YLR127C 2562 nt3.06□□□□□ -1.92
SSL1Q04673 SKT5YBL061C 2091 nt3.05□□□□□ -1.92
SSL1Q04673 DOA4YDR069C 2781 nt3.05□□□□□ -1.92
SSL1Q04673 TLC1TLC1 1301 nt3.05□□□□□ -1.92
SSL1Q04673 HTL1YCR020W-B 237 nt3.05□□□□□ -1.92
SSL1Q04673 RPL35AYDL191W 363 nt3.05□□□□□ -1.92
SSL1Q04673 YDL211CYDL211C 1119 nt3.05□□□□□ -1.92
SSL1Q04673 DLS1YJL065C 504 nt3.05□□□□□ -1.92
SSL1Q04673 YLR458WYLR458W 381 nt3.05□□□□□ -1.92
SSL1Q04673 TRM7YBR061C 933 nt3.05□□□□□ -1.92
Retrieved 100 of 7,029 protein–RNA pairs in 19.1 ms