Protein–RNA interactions for Protein: P39944

UBP5, Ubiquitin carboxyl-terminal hydrolase 5, yeastyeast

Predictions only

Length 805 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP5P39944 YCL001W-BYCL001W-B 255 nt3.43□□□□□ -1.86
UBP5P39944 snR52snR52 92 nt3.43□□□□□ -1.86
UBP5P39944 BCH2YKR027W 2298 nt3.43□□□□□ -1.86
UBP5P39944 SIZ1YDR409W 2715 nt3.43□□□□□ -1.86
UBP5P39944 PRP42YDR235W 1635 nt3.43□□□□□ -1.86
UBP5P39944 TRM2YKR056W 1920 nt3.42□□□□□ -1.86
UBP5P39944 NRP1YDL167C 2160 nt3.42□□□□□ -1.86
UBP5P39944 VPS64YDR200C 1815 nt3.42□□□□□ -1.86
UBP5P39944 STE23YLR389C 3084 nt3.42□□□□□ -1.86
UBP5P39944 PEX6YNL329C 3093 nt3.42□□□□□ -1.86
UBP5P39944 AUS1YOR011W 4185 nt3.42□□□□□ -1.86
UBP5P39944 tF(GAA)DtF(GAA)D 73 nt3.42□□□□□ -1.86
UBP5P39944 tF(GAA)NtF(GAA)N 73 nt3.42□□□□□ -1.86
UBP5P39944 YJR140W-AYJR140W-A 150 nt3.42□□□□□ -1.86
UBP5P39944 YOR015WYOR015W 360 nt3.42□□□□□ -1.86
UBP5P39944 TIM12YBR091C 330 nt3.42□□□□□ -1.86
UBP5P39944 MDM1YML104C 3384 nt3.42□□□□□ -1.86
UBP5P39944 CIN8YEL061C 3003 nt3.42□□□□□ -1.86
UBP5P39944 MSB2YGR014W 3921 nt3.42□□□□□ -1.86
UBP5P39944 MDN1YLR106C 14733 nt3.42□□□□□ -1.86
UBP5P39944 NAN1YPL126W 2691 nt3.41□□□□□ -1.86
UBP5P39944 SYF1YDR416W 2580 nt3.41□□□□□ -1.86
UBP5P39944 SPA2YLL021W 4401 nt3.41□□□□□ -1.86
UBP5P39944 RPL32YBL092W 393 nt3.41□□□□□ -1.86
UBP5P39944 ERB1YMR049C 2424 nt3.41□□□□□ -1.86
UBP5P39944 ATP22YDR350C 2055 nt3.4□□□□□ -1.86
UBP5P39944 NMD2YHR077C 3270 nt3.4□□□□□ -1.86
UBP5P39944 DPB11YJL090C 2295 nt3.4□□□□□ -1.86
UBP5P39944 REB1YBR049C 2433 nt3.4□□□□□ -1.86
UBP5P39944 STU1YBL034C 4542 nt3.4□□□□□ -1.86
UBP5P39944 NSP1YJL041W 2472 nt3.39□□□□□ -1.87
UBP5P39944 FRE4YNR060W 2160 nt3.39□□□□□ -1.87
UBP5P39944 MDM32YOR147W 1869 nt3.39□□□□□ -1.87
UBP5P39944 ALO1YML086C 1581 nt3.39□□□□□ -1.87
UBP5P39944 SSE1YPL106C 2082 nt3.39□□□□□ -1.87
UBP5P39944 YLR120W-AYLR120W-A 102 nt3.39□□□□□ -1.87
UBP5P39944 HEF3YNL014W 3135 nt3.39□□□□□ -1.87
UBP5P39944 URA2YJL130C 6645 nt3.39□□□□□ -1.87
UBP5P39944 VPS41YDR080W 2979 nt3.38□□□□□ -1.87
UBP5P39944 PAU23YLR037C 375 nt3.38□□□□□ -1.87
UBP5P39944 RRT15YLR162W-A 189 nt3.38□□□□□ -1.87
UBP5P39944 LSM7YNL147W 348 nt3.38□□□□□ -1.87
UBP5P39944 FLO5YHR211W 3228 nt3.38□□□□□ -1.87
UBP5P39944 UBP5YER144C 2418 nt3.37□□□□□ -1.87
UBP5P39944 YDR426CYDR426C 378 nt3.37□□□□□ -1.87
UBP5P39944 RPS26BYER131W 360 nt3.37□□□□□ -1.87
UBP5P39944 YHL041WYHL041W 450 nt3.37□□□□□ -1.87
UBP5P39944 YJL222W-BYJL222W-B 138 nt3.37□□□□□ -1.87
UBP5P39944 YKR033CYKR033C 426 nt3.37□□□□□ -1.87
UBP5P39944 YLR012CYLR012C 300 nt3.37□□□□□ -1.87
UBP5P39944 APC9YLR102C 798 nt3.37□□□□□ -1.87
UBP5P39944 YML037CYML037C 1023 nt3.37□□□□□ -1.87
UBP5P39944 YBL028CYBL028C 321 nt3.37□□□□□ -1.87
UBP5P39944 YNL103W-AYNL103W-A 90 nt3.37□□□□□ -1.87
UBP5P39944 YPR063CYPR063C 423 nt3.37□□□□□ -1.87
UBP5P39944 TOF2YKR010C 2316 nt3.37□□□□□ -1.87
UBP5P39944 CHO2YGR157W 2610 nt3.37□□□□□ -1.87
UBP5P39944 REV1YOR346W 2958 nt3.36□□□□□ -1.87
UBP5P39944 ALG8YOR067C 1734 nt3.36□□□□□ -1.87
UBP5P39944 SNU13YEL026W 381 nt3.36□□□□□ -1.87
UBP5P39944 YFL065CYFL065C 309 nt3.36□□□□□ -1.87
UBP5P39944 YJL020W-AYJL020W-A 258 nt3.36□□□□□ -1.87
UBP5P39944 LSM1YJL124C 519 nt3.36□□□□□ -1.87
UBP5P39944 NTO1YPR031W 2247 nt3.36□□□□□ -1.87
UBP5P39944 IRC3YDR332W 2070 nt3.35□□□□□ -1.87
UBP5P39944 SPT16YGL207W 3108 nt3.35□□□□□ -1.87
UBP5P39944 SRP68YPL243W 1800 nt3.35□□□□□ -1.87
UBP5P39944 YBR184WYBR184W 1572 nt3.35□□□□□ -1.87
UBP5P39944 snR72snR72 98 nt3.35□□□□□ -1.87
UBP5P39944 MBB1YJL199C 327 nt3.35□□□□□ -1.87
UBP5P39944 MRPL33YMR286W 261 nt3.35□□□□□ -1.87
UBP5P39944 YBR131C-AYBR131C-A 90 nt3.35□□□□□ -1.87
UBP5P39944 SSP1YHR184W 1716 nt3.34□□□□□ -1.87
UBP5P39944 MES1YGR264C 2256 nt3.34□□□□□ -1.87
UBP5P39944 SKP2YNL311C 2292 nt3.34□□□□□ -1.87
UBP5P39944 TIM13YGR181W 318 nt3.34□□□□□ -1.87
UBP5P39944 tT(UGU)Q1tT(UGU)Q1 76 nt3.34□□□□□ -1.87
UBP5P39944 YOR161W-BYOR161W-B 261 nt3.34□□□□□ -1.87
UBP5P39944 YPR002C-AYPR002C-A 198 nt3.34□□□□□ -1.87
UBP5P39944 CHS2YBR038W 2892 nt3.34□□□□□ -1.87
UBP5P39944 RED1YLR263W 2484 nt3.33□□□□□ -1.88
UBP5P39944 AIM9YER080W 1884 nt3.33□□□□□ -1.88
UBP5P39944 HPA3YEL066W 540 nt3.33□□□□□ -1.88
UBP5P39944 YNL028WYNL028W 318 nt3.33□□□□□ -1.88
UBP5P39944 YOR376WYOR376W 369 nt3.33□□□□□ -1.88
UBP5P39944 CSR2YPR030W 3366 nt3.32□□□□□ -1.88
UBP5P39944 FAA2YER015W 2235 nt3.32□□□□□ -1.88
UBP5P39944 EPL1YFL024C 2499 nt3.32□□□□□ -1.88
UBP5P39944 YDR464C-AYDR464C-A 189 nt3.32□□□□□ -1.88
UBP5P39944 PMP2YEL017C-A 132 nt3.32□□□□□ -1.88
UBP5P39944 YIL142C-AYIL142C-A 333 nt3.32□□□□□ -1.88
UBP5P39944 YKL165C-AYKL165C-A 234 nt3.32□□□□□ -1.88
UBP5P39944 HHT1YBR010W 411 nt3.32□□□□□ -1.88
UBP5P39944 CCT7YJL111W 1653 nt3.32□□□□□ -1.88
UBP5P39944 RLM1YPL089C 2031 nt3.32□□□□□ -1.88
UBP5P39944 STE6YKL209C 3873 nt3.31□□□□□ -1.88
UBP5P39944 TIF4631YGR162W 2859 nt3.31□□□□□ -1.88
UBP5P39944 SWA2YDR320C 2007 nt3.31□□□□□ -1.88
UBP5P39944 HEH2YDR458C 1992 nt3.31□□□□□ -1.88
UBP5P39944 MNT3YIL014W 1893 nt3.31□□□□□ -1.88
Retrieved 100 of 7,029 protein–RNA pairs in 92.2 ms