Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 CYP2T1P-201ENST00000432607 1285 ntBASIC20.61■□□□□ 0.89
HLA-DPA1P20036 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.61■□□□□ 0.89
HLA-DPA1P20036 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.61■□□□□ 0.89
HLA-DPA1P20036 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.61■□□□□ 0.89
HLA-DPA1P20036 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.61■□□□□ 0.89
HLA-DPA1P20036 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HLA-DPA1P20036 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
HLA-DPA1P20036 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HLA-DPA1P20036 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.61■□□□□ 0.89
HLA-DPA1P20036 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HLA-DPA1P20036 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
HLA-DPA1P20036 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
HLA-DPA1P20036 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
HLA-DPA1P20036 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.6■□□□□ 0.89
HLA-DPA1P20036 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HLA-DPA1P20036 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
HLA-DPA1P20036 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HLA-DPA1P20036 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HLA-DPA1P20036 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.6■□□□□ 0.89
HLA-DPA1P20036 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
HLA-DPA1P20036 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.6■□□□□ 0.89
HLA-DPA1P20036 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.6■□□□□ 0.89
HLA-DPA1P20036 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.6■□□□□ 0.89
HLA-DPA1P20036 AC069236.1-201ENST00000604339 616 ntBASIC20.6■□□□□ 0.89
HLA-DPA1P20036 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.6■□□□□ 0.89
HLA-DPA1P20036 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
HLA-DPA1P20036 AC073111.5-205ENST00000641717 521 ntBASIC20.6■□□□□ 0.89
HLA-DPA1P20036 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
HLA-DPA1P20036 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
HLA-DPA1P20036 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HLA-DPA1P20036 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HLA-DPA1P20036 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.6■□□□□ 0.89
HLA-DPA1P20036 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.6■□□□□ 0.89
HLA-DPA1P20036 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.6■□□□□ 0.89
HLA-DPA1P20036 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.6■□□□□ 0.89
HLA-DPA1P20036 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HLA-DPA1P20036 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-DPA1P20036 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-DPA1P20036 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-DPA1P20036 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
HLA-DPA1P20036 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-DPA1P20036 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-DPA1P20036 CYP21A1P-202ENST00000354927 1481 ntBASIC20.59■□□□□ 0.89
HLA-DPA1P20036 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
HLA-DPA1P20036 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-DPA1P20036 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-DPA1P20036 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-DPA1P20036 PGM5P4-201ENST00000421970 445 ntBASIC20.59■□□□□ 0.89
HLA-DPA1P20036 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.59■□□□□ 0.89
HLA-DPA1P20036 AC100791.3-201ENST00000617619 330 ntBASIC20.59■□□□□ 0.89
HLA-DPA1P20036 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.59■□□□□ 0.89
HLA-DPA1P20036 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.59■□□□□ 0.89
HLA-DPA1P20036 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.59■□□□□ 0.89
HLA-DPA1P20036 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.59■□□□□ 0.89
HLA-DPA1P20036 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-DPA1P20036 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-DPA1P20036 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-DPA1P20036 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
HLA-DPA1P20036 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-DPA1P20036 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HLA-DPA1P20036 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HLA-DPA1P20036 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
HLA-DPA1P20036 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.58■□□□□ 0.89
HLA-DPA1P20036 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
HLA-DPA1P20036 AP005212.1-201ENST00000581547 1997 ntBASIC20.58■□□□□ 0.89
HLA-DPA1P20036 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HLA-DPA1P20036 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.58■□□□□ 0.89
HLA-DPA1P20036 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.58■□□□□ 0.89
HLA-DPA1P20036 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.58■□□□□ 0.89
HLA-DPA1P20036 AL121603.2-201ENST00000557373 2117 ntBASIC20.58■□□□□ 0.89
HLA-DPA1P20036 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.58■□□□□ 0.89
HLA-DPA1P20036 AC008694.1-202ENST00000636953 945 ntBASIC20.58■□□□□ 0.89
HLA-DPA1P20036 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
HLA-DPA1P20036 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
HLA-DPA1P20036 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HLA-DPA1P20036 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.58■□□□□ 0.88
HLA-DPA1P20036 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.58■□□□□ 0.88
HLA-DPA1P20036 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.58■□□□□ 0.88
HLA-DPA1P20036 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HLA-DPA1P20036 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-DPA1P20036 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-DPA1P20036 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-DPA1P20036 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
HLA-DPA1P20036 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
HLA-DPA1P20036 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.57■□□□□ 0.88
HLA-DPA1P20036 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
HLA-DPA1P20036 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-DPA1P20036 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.57■□□□□ 0.88
HLA-DPA1P20036 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.57■□□□□ 0.88
HLA-DPA1P20036 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-DPA1P20036 AC087633.2-202ENST00000565166 1439 ntBASIC20.57■□□□□ 0.88
HLA-DPA1P20036 AC005181.1-201ENST00000604782 1256 ntBASIC20.57■□□□□ 0.88
HLA-DPA1P20036 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.57■□□□□ 0.88
HLA-DPA1P20036 GABARAPL3-202ENST00000624044 1851 ntBASIC20.57■□□□□ 0.88
HLA-DPA1P20036 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-DPA1P20036 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-DPA1P20036 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-DPA1P20036 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-DPA1P20036 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
HLA-DPA1P20036 AC073314.1-201ENST00000568729 2216 ntBASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms