Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 AC133681.1-201ENST00000465482 601 ntBASIC22.35■■□□□ 1.17
CHRNA1P02708 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC22.35■■□□□ 1.17
CHRNA1P02708 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC22.35■■□□□ 1.17
CHRNA1P02708 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
CHRNA1P02708 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC22.35■■□□□ 1.17
CHRNA1P02708 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC22.35■■□□□ 1.17
CHRNA1P02708 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CHRNA1P02708 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CHRNA1P02708 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
CHRNA1P02708 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
CHRNA1P02708 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CHRNA1P02708 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC22.34■■□□□ 1.17
CHRNA1P02708 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC22.34■■□□□ 1.17
CHRNA1P02708 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC22.34■■□□□ 1.17
CHRNA1P02708 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC22.34■■□□□ 1.17
CHRNA1P02708 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CHRNA1P02708 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC22.34■■□□□ 1.17
CHRNA1P02708 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CHRNA1P02708 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CHRNA1P02708 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
CHRNA1P02708 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
CHRNA1P02708 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC22.34■■□□□ 1.17
CHRNA1P02708 AC011484.1-201ENST00000377652 1995 ntBASIC22.34■■□□□ 1.17
CHRNA1P02708 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
CHRNA1P02708 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC22.33■■□□□ 1.17
CHRNA1P02708 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC22.33■■□□□ 1.17
CHRNA1P02708 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CHRNA1P02708 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CHRNA1P02708 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
CHRNA1P02708 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
CHRNA1P02708 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
CHRNA1P02708 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC22.33■■□□□ 1.17
CHRNA1P02708 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CHRNA1P02708 MDFI-202ENST00000373050 809 ntTSL 2 BASIC22.33■■□□□ 1.17
CHRNA1P02708 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CHRNA1P02708 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC22.33■■□□□ 1.17
CHRNA1P02708 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC22.33■■□□□ 1.17
CHRNA1P02708 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CHRNA1P02708 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.16
CHRNA1P02708 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
CHRNA1P02708 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC22.33■■□□□ 1.16
CHRNA1P02708 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
CHRNA1P02708 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CHRNA1P02708 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CHRNA1P02708 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
CHRNA1P02708 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CHRNA1P02708 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
CHRNA1P02708 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
CHRNA1P02708 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CHRNA1P02708 RPS2P55-201ENST00000397318 883 ntBASIC22.32■■□□□ 1.16
CHRNA1P02708 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CHRNA1P02708 AC107956.1-201ENST00000494359 873 ntBASIC22.32■■□□□ 1.16
CHRNA1P02708 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC22.32■■□□□ 1.16
CHRNA1P02708 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
CHRNA1P02708 REXO2-216ENST00000544196 452 ntTSL 3 BASIC22.32■■□□□ 1.16
CHRNA1P02708 AC233702.5-201ENST00000584107 538 ntBASIC22.32■■□□□ 1.16
CHRNA1P02708 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC22.32■■□□□ 1.16
CHRNA1P02708 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC22.32■■□□□ 1.16
CHRNA1P02708 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC22.31■■□□□ 1.16
CHRNA1P02708 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
CHRNA1P02708 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC22.31■■□□□ 1.16
CHRNA1P02708 MYB-221ENST00000527615 2381 ntTSL 5 BASIC22.31■■□□□ 1.16
CHRNA1P02708 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CHRNA1P02708 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CHRNA1P02708 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
CHRNA1P02708 AC244015.2-201ENST00000616358 1861 ntBASIC22.31■■□□□ 1.16
CHRNA1P02708 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CHRNA1P02708 PARN-205ENST00000539279 1557 ntTSL 2 BASIC22.31■■□□□ 1.16
CHRNA1P02708 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CHRNA1P02708 RER1-204ENST00000378518 522 ntTSL 3 BASIC22.31■■□□□ 1.16
CHRNA1P02708 AL390719.1-204ENST00000412397 1219 ntBASIC22.31■■□□□ 1.16
CHRNA1P02708 GXYLT1P3-201ENST00000453058 1193 ntBASIC22.31■■□□□ 1.16
CHRNA1P02708 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CHRNA1P02708 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC22.31■■□□□ 1.16
CHRNA1P02708 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CHRNA1P02708 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC22.31■■□□□ 1.16
CHRNA1P02708 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
CHRNA1P02708 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CHRNA1P02708 STK25-205ENST00000405883 1904 ntTSL 2 BASIC22.31■■□□□ 1.16
CHRNA1P02708 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CHRNA1P02708 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
CHRNA1P02708 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC22.3■■□□□ 1.16
CHRNA1P02708 AC239809.2-201ENST00000415381 517 ntBASIC22.3■■□□□ 1.16
CHRNA1P02708 AC012618.2-201ENST00000428058 849 ntBASIC22.3■■□□□ 1.16
CHRNA1P02708 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC22.3■■□□□ 1.16
CHRNA1P02708 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC22.3■■□□□ 1.16
CHRNA1P02708 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC22.3■■□□□ 1.16
CHRNA1P02708 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CHRNA1P02708 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
CHRNA1P02708 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC22.3■■□□□ 1.16
CHRNA1P02708 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
CHRNA1P02708 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
CHRNA1P02708 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CHRNA1P02708 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC22.29■■□□□ 1.16
CHRNA1P02708 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CHRNA1P02708 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
CHRNA1P02708 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CHRNA1P02708 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC22.29■■□□□ 1.16
CHRNA1P02708 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC22.29■■□□□ 1.16
CHRNA1P02708 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms