Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC32.08■■■□□ 2.73
PCF11O94913 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC32.08■■■□□ 2.73
PCF11O94913 MIR718-201ENST00000390190 70 ntBASIC32.08■■■□□ 2.73
PCF11O94913 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC32.08■■■□□ 2.73
PCF11O94913 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC32.08■■■□□ 2.73
PCF11O94913 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
PCF11O94913 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC32.08■■■□□ 2.73
PCF11O94913 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC32.08■■■□□ 2.73
PCF11O94913 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC32.08■■■□□ 2.73
PCF11O94913 AL024507.2-201ENST00000606070 2574 ntBASIC32.07■■■□□ 2.73
PCF11O94913 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
PCF11O94913 RER1-204ENST00000378518 522 ntTSL 3 BASIC32.07■■■□□ 2.72
PCF11O94913 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
PCF11O94913 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC32.07■■■□□ 2.72
PCF11O94913 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC32.07■■■□□ 2.72
PCF11O94913 MIR2861-201ENST00000636310 90 ntBASIC32.07■■■□□ 2.72
PCF11O94913 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
PCF11O94913 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
PCF11O94913 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
PCF11O94913 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
PCF11O94913 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC32.07■■■□□ 2.72
PCF11O94913 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
PCF11O94913 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
PCF11O94913 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
PCF11O94913 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
PCF11O94913 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC32.07■■■□□ 2.72
PCF11O94913 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
PCF11O94913 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
PCF11O94913 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
PCF11O94913 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
PCF11O94913 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC32.06■■■□□ 2.72
PCF11O94913 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
PCF11O94913 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC32.06■■■□□ 2.72
PCF11O94913 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC32.06■■■□□ 2.72
PCF11O94913 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
PCF11O94913 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC32.05■■■□□ 2.72
PCF11O94913 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC32.05■■■□□ 2.72
PCF11O94913 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
PCF11O94913 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC32.05■■■□□ 2.72
PCF11O94913 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
PCF11O94913 ISG20-202ENST00000379224 540 ntTSL 3 BASIC32.05■■■□□ 2.72
PCF11O94913 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC32.05■■■□□ 2.72
PCF11O94913 REXO2-216ENST00000544196 452 ntTSL 3 BASIC32.05■■■□□ 2.72
PCF11O94913 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC32.05■■■□□ 2.72
PCF11O94913 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC32.05■■■□□ 2.72
PCF11O94913 AC011484.1-201ENST00000377652 1995 ntBASIC32.05■■■□□ 2.72
PCF11O94913 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC32.04■■■□□ 2.72
PCF11O94913 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC32.04■■■□□ 2.72
PCF11O94913 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
PCF11O94913 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
PCF11O94913 AC012618.2-201ENST00000428058 849 ntBASIC32.04■■■□□ 2.72
PCF11O94913 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC32.04■■■□□ 2.72
PCF11O94913 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC32.04■■■□□ 2.72
PCF11O94913 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
PCF11O94913 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
PCF11O94913 AC239809.2-201ENST00000415381 517 ntBASIC32.03■■■□□ 2.72
PCF11O94913 HES2-206ENST00000489730 730 ntTSL 2 BASIC32.03■■■□□ 2.72
PCF11O94913 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
PCF11O94913 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
PCF11O94913 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC32.03■■■□□ 2.72
PCF11O94913 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC32.03■■■□□ 2.72
PCF11O94913 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC32.03■■■□□ 2.72
PCF11O94913 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
PCF11O94913 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC32.02■■■□□ 2.72
PCF11O94913 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC32.02■■■□□ 2.72
PCF11O94913 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC32.02■■■□□ 2.72
PCF11O94913 EP400NL-214ENST00000641289 2402 ntBASIC32.02■■■□□ 2.72
PCF11O94913 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC32.02■■■□□ 2.72
PCF11O94913 AC133561.1-201ENST00000568600 2415 ntBASIC32.02■■■□□ 2.72
PCF11O94913 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC32.02■■■□□ 2.72
PCF11O94913 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC32.02■■■□□ 2.72
PCF11O94913 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC32.02■■■□□ 2.72
PCF11O94913 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC32.02■■■□□ 2.72
PCF11O94913 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC32.02■■■□□ 2.72
PCF11O94913 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC32.02■■■□□ 2.72
PCF11O94913 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC32.02■■■□□ 2.72
PCF11O94913 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
PCF11O94913 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC32.01■■■□□ 2.72
PCF11O94913 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC32.01■■■□□ 2.72
PCF11O94913 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC32.01■■■□□ 2.71
PCF11O94913 LY6E-205ENST00000519611 635 ntTSL 3 BASIC32.01■■■□□ 2.71
PCF11O94913 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC32.01■■■□□ 2.71
PCF11O94913 BRWD1-AS2-201ENST00000603064 1028 ntBASIC32.01■■■□□ 2.71
PCF11O94913 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC32.01■■■□□ 2.71
PCF11O94913 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC32■■■□□ 2.71
PCF11O94913 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC32■■■□□ 2.71
PCF11O94913 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC32■■■□□ 2.71
PCF11O94913 AC133681.1-201ENST00000465482 601 ntBASIC32■■■□□ 2.71
PCF11O94913 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC32■■■□□ 2.71
PCF11O94913 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC32■■■□□ 2.71
PCF11O94913 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC32■■■□□ 2.71
PCF11O94913 AC006557.6-201ENST00000623071 864 ntBASIC32■■■□□ 2.71
PCF11O94913 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC32■■■□□ 2.71
PCF11O94913 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
PCF11O94913 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC32■■■□□ 2.71
PCF11O94913 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC32■■■□□ 2.71
PCF11O94913 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
PCF11O94913 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC32■■■□□ 2.71
PCF11O94913 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC32■■■□□ 2.71
PCF11O94913 FBXW4P1-201ENST00000426721 2239 ntBASIC32■■■□□ 2.71
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms