Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
PRICKLE3O43900 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PRICKLE3O43900 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
PRICKLE3O43900 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PRICKLE3O43900 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PRICKLE3O43900 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PRICKLE3O43900 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PRICKLE3O43900 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PRICKLE3O43900 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
PRICKLE3O43900 DUSP5P2-201ENST00000426873 1033 ntBASIC19.63■□□□□ 0.73
PRICKLE3O43900 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.63■□□□□ 0.73
PRICKLE3O43900 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.63■□□□□ 0.73
PRICKLE3O43900 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.63■□□□□ 0.73
PRICKLE3O43900 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.63■□□□□ 0.73
PRICKLE3O43900 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
PRICKLE3O43900 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
PRICKLE3O43900 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PRICKLE3O43900 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.63■□□□□ 0.73
PRICKLE3O43900 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PRICKLE3O43900 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PRICKLE3O43900 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.62■□□□□ 0.73
PRICKLE3O43900 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
PRICKLE3O43900 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PRICKLE3O43900 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.62■□□□□ 0.73
PRICKLE3O43900 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PRICKLE3O43900 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PRICKLE3O43900 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.62■□□□□ 0.73
PRICKLE3O43900 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PRICKLE3O43900 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.62■□□□□ 0.73
PRICKLE3O43900 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PRICKLE3O43900 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PRICKLE3O43900 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PRICKLE3O43900 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.62■□□□□ 0.73
PRICKLE3O43900 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PRICKLE3O43900 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PRICKLE3O43900 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.62■□□□□ 0.73
PRICKLE3O43900 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.62■□□□□ 0.73
PRICKLE3O43900 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.62■□□□□ 0.73
PRICKLE3O43900 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.62■□□□□ 0.73
PRICKLE3O43900 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.62■□□□□ 0.73
PRICKLE3O43900 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PRICKLE3O43900 FP700111.2-201ENST00000619190 1892 ntBASIC19.62■□□□□ 0.73
PRICKLE3O43900 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PRICKLE3O43900 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.61■□□□□ 0.73
PRICKLE3O43900 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.61■□□□□ 0.73
PRICKLE3O43900 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PRICKLE3O43900 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PRICKLE3O43900 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PRICKLE3O43900 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.61■□□□□ 0.73
PRICKLE3O43900 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PRICKLE3O43900 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
PRICKLE3O43900 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PRICKLE3O43900 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
PRICKLE3O43900 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.61■□□□□ 0.73
PRICKLE3O43900 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
PRICKLE3O43900 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.61■□□□□ 0.73
PRICKLE3O43900 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.61■□□□□ 0.73
PRICKLE3O43900 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.61■□□□□ 0.73
PRICKLE3O43900 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PRICKLE3O43900 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PRICKLE3O43900 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
PRICKLE3O43900 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PRICKLE3O43900 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PRICKLE3O43900 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.61■□□□□ 0.73
PRICKLE3O43900 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PRICKLE3O43900 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.61■□□□□ 0.73
PRICKLE3O43900 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PRICKLE3O43900 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
PRICKLE3O43900 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.6■□□□□ 0.73
PRICKLE3O43900 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PRICKLE3O43900 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.6■□□□□ 0.73
PRICKLE3O43900 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
PRICKLE3O43900 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PRICKLE3O43900 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PRICKLE3O43900 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.6■□□□□ 0.73
PRICKLE3O43900 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.6■□□□□ 0.73
PRICKLE3O43900 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PRICKLE3O43900 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.6■□□□□ 0.73
PRICKLE3O43900 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PRICKLE3O43900 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PRICKLE3O43900 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.6■□□□□ 0.73
PRICKLE3O43900 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
PRICKLE3O43900 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PRICKLE3O43900 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.6■□□□□ 0.73
PRICKLE3O43900 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PRICKLE3O43900 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PRICKLE3O43900 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PRICKLE3O43900 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PRICKLE3O43900 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PRICKLE3O43900 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.59■□□□□ 0.73
PRICKLE3O43900 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PRICKLE3O43900 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PRICKLE3O43900 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.59■□□□□ 0.73
PRICKLE3O43900 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.59■□□□□ 0.73
PRICKLE3O43900 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.59■□□□□ 0.73
PRICKLE3O43900 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.59■□□□□ 0.73
PRICKLE3O43900 AC083880.1-201ENST00000608266 535 ntBASIC19.59■□□□□ 0.73
PRICKLE3O43900 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.59■□□□□ 0.73
PRICKLE3O43900 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.59■□□□□ 0.73
PRICKLE3O43900 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms