Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.99■□□□□ 0.95
DFFAO00273 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
DFFAO00273 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
DFFAO00273 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
DFFAO00273 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
DFFAO00273 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
DFFAO00273 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
DFFAO00273 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
DFFAO00273 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
DFFAO00273 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
DFFAO00273 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
DFFAO00273 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
DFFAO00273 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
DFFAO00273 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
DFFAO00273 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.98■□□□□ 0.95
DFFAO00273 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
DFFAO00273 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.98■□□□□ 0.95
DFFAO00273 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
DFFAO00273 AC006970.2-201ENST00000450065 779 ntBASIC20.98■□□□□ 0.95
DFFAO00273 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.98■□□□□ 0.95
DFFAO00273 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
DFFAO00273 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.98■□□□□ 0.95
DFFAO00273 AL050303.2-201ENST00000619798 666 ntBASIC20.98■□□□□ 0.95
DFFAO00273 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
DFFAO00273 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
DFFAO00273 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
DFFAO00273 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
DFFAO00273 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.98■□□□□ 0.95
DFFAO00273 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.98■□□□□ 0.95
DFFAO00273 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.97■□□□□ 0.95
DFFAO00273 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.97■□□□□ 0.95
DFFAO00273 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
DFFAO00273 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.97■□□□□ 0.95
DFFAO00273 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.97■□□□□ 0.95
DFFAO00273 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
DFFAO00273 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
DFFAO00273 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
DFFAO00273 AL121603.2-201ENST00000557373 2117 ntBASIC20.97■□□□□ 0.95
DFFAO00273 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.97■□□□□ 0.95
DFFAO00273 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
DFFAO00273 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
DFFAO00273 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
DFFAO00273 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
DFFAO00273 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
DFFAO00273 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
DFFAO00273 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
DFFAO00273 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
DFFAO00273 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
DFFAO00273 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
DFFAO00273 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
DFFAO00273 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
DFFAO00273 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.96■□□□□ 0.95
DFFAO00273 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.96■□□□□ 0.95
DFFAO00273 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
DFFAO00273 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
DFFAO00273 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.96■□□□□ 0.95
DFFAO00273 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
DFFAO00273 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
DFFAO00273 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
DFFAO00273 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
DFFAO00273 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
DFFAO00273 OR10C1-204ENST00000622521 1039 ntBASIC20.96■□□□□ 0.95
DFFAO00273 MIR2861-201ENST00000636310 90 ntBASIC20.96■□□□□ 0.95
DFFAO00273 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
DFFAO00273 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
DFFAO00273 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
DFFAO00273 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.96■□□□□ 0.95
DFFAO00273 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
DFFAO00273 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
DFFAO00273 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
DFFAO00273 CYP21A1P-202ENST00000354927 1481 ntBASIC20.95■□□□□ 0.94
DFFAO00273 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
DFFAO00273 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
DFFAO00273 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.95■□□□□ 0.94
DFFAO00273 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.95■□□□□ 0.94
DFFAO00273 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.95■□□□□ 0.94
DFFAO00273 AL157384.1-201ENST00000445995 2473 ntBASIC20.95■□□□□ 0.94
DFFAO00273 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.95■□□□□ 0.94
DFFAO00273 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.95■□□□□ 0.94
DFFAO00273 AC093787.1-201ENST00000450396 207 ntBASIC20.95■□□□□ 0.94
DFFAO00273 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.95■□□□□ 0.94
DFFAO00273 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
DFFAO00273 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
DFFAO00273 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
DFFAO00273 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
DFFAO00273 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
DFFAO00273 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
DFFAO00273 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
DFFAO00273 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
DFFAO00273 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
DFFAO00273 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.94■□□□□ 0.94
DFFAO00273 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
DFFAO00273 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
DFFAO00273 AC090192.1-201ENST00000517740 490 ntBASIC20.94■□□□□ 0.94
DFFAO00273 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.94■□□□□ 0.94
DFFAO00273 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
DFFAO00273 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
DFFAO00273 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
DFFAO00273 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
DFFAO00273 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms