Protein–RNA interactions for Protein: Q9EQR5

Lime1, Lck-interacting transmembrane adapter 1, mousemouse

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lime1Q9EQR5 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Lime1Q9EQR5 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Lime1Q9EQR5 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.37■■□□□ 1.01
Lime1Q9EQR5 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Lime1Q9EQR5 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Lime1Q9EQR5 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Lime1Q9EQR5 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Lime1Q9EQR5 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Lime1Q9EQR5 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Lime1Q9EQR5 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Lime1Q9EQR5 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21.34■■□□□ 1.01
Lime1Q9EQR5 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21.33■■□□□ 1.01
Lime1Q9EQR5 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Lime1Q9EQR5 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.32■■□□□ 1
Lime1Q9EQR5 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC21.32■■□□□ 1
Lime1Q9EQR5 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Lime1Q9EQR5 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC21.31■■□□□ 1
Lime1Q9EQR5 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Lime1Q9EQR5 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21.3■■□□□ 1
Lime1Q9EQR5 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.3■■□□□ 1
Lime1Q9EQR5 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.3■■□□□ 1
Lime1Q9EQR5 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.29■■□□□ 1
Lime1Q9EQR5 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Lime1Q9EQR5 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.29■■□□□ 1
Lime1Q9EQR5 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Lime1Q9EQR5 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Lime1Q9EQR5 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Lime1Q9EQR5 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Lime1Q9EQR5 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.28■■□□□ 1
Lime1Q9EQR5 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Lime1Q9EQR5 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Lime1Q9EQR5 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21.27■■□□□ 1
Lime1Q9EQR5 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC21.27■■□□□ 1
Lime1Q9EQR5 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.26■□□□□ 0.99
Lime1Q9EQR5 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lime1Q9EQR5 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.26■□□□□ 0.99
Lime1Q9EQR5 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Lime1Q9EQR5 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Lime1Q9EQR5 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Lime1Q9EQR5 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Lime1Q9EQR5 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lime1Q9EQR5 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Lime1Q9EQR5 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21.24■□□□□ 0.99
Lime1Q9EQR5 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lime1Q9EQR5 Gm24804-201ENSMUST00000174982 85 ntBASIC21.24■□□□□ 0.99
Lime1Q9EQR5 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Lime1Q9EQR5 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lime1Q9EQR5 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lime1Q9EQR5 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Lime1Q9EQR5 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lime1Q9EQR5 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lime1Q9EQR5 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lime1Q9EQR5 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lime1Q9EQR5 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Lime1Q9EQR5 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lime1Q9EQR5 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lime1Q9EQR5 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lime1Q9EQR5 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.21■□□□□ 0.99
Lime1Q9EQR5 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC21.21■□□□□ 0.99
Lime1Q9EQR5 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Lime1Q9EQR5 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Lime1Q9EQR5 Gm16148-201ENSMUST00000119653 893 ntBASIC21.17■□□□□ 0.98
Lime1Q9EQR5 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Lime1Q9EQR5 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lime1Q9EQR5 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lime1Q9EQR5 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Lime1Q9EQR5 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.13■□□□□ 0.97
Lime1Q9EQR5 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Lime1Q9EQR5 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Lime1Q9EQR5 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
Lime1Q9EQR5 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC21.12■□□□□ 0.97
Lime1Q9EQR5 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Lime1Q9EQR5 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Lime1Q9EQR5 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Lime1Q9EQR5 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lime1Q9EQR5 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Lime1Q9EQR5 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Lime1Q9EQR5 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Lime1Q9EQR5 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Lime1Q9EQR5 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Lime1Q9EQR5 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Lime1Q9EQR5 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Lime1Q9EQR5 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
Lime1Q9EQR5 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Lime1Q9EQR5 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Lime1Q9EQR5 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lime1Q9EQR5 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Lime1Q9EQR5 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.05■□□□□ 0.96
Lime1Q9EQR5 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC21.04■□□□□ 0.96
Lime1Q9EQR5 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lime1Q9EQR5 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Lime1Q9EQR5 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Lime1Q9EQR5 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Lime1Q9EQR5 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Lime1Q9EQR5 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Lime1Q9EQR5 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Lime1Q9EQR5 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Lime1Q9EQR5 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Lime1Q9EQR5 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Lime1Q9EQR5 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms