Protein–RNA interactions for Protein: Q9EPL6

Mmp1b, Interstitial collagenase B, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp1bQ9EPL6 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Mmp1bQ9EPL6 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Mmp1bQ9EPL6 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Mmp1bQ9EPL6 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.28■■□□□ 1
Mmp1bQ9EPL6 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Mmp1bQ9EPL6 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Mmp1bQ9EPL6 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Mmp1bQ9EPL6 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.26■□□□□ 0.99
Mmp1bQ9EPL6 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Mmp1bQ9EPL6 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Mmp1bQ9EPL6 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Mmp1bQ9EPL6 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Mmp1bQ9EPL6 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC21.23■□□□□ 0.99
Mmp1bQ9EPL6 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Mmp1bQ9EPL6 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Mmp1bQ9EPL6 Gm16148-201ENSMUST00000119653 893 ntBASIC21.22■□□□□ 0.99
Mmp1bQ9EPL6 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Mmp1bQ9EPL6 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Mmp1bQ9EPL6 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Mmp1bQ9EPL6 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.22■□□□□ 0.99
Mmp1bQ9EPL6 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Mmp1bQ9EPL6 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Mmp1bQ9EPL6 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Mmp1bQ9EPL6 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Mmp1bQ9EPL6 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.2■□□□□ 0.99
Mmp1bQ9EPL6 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Mmp1bQ9EPL6 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
Mmp1bQ9EPL6 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
Mmp1bQ9EPL6 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Mmp1bQ9EPL6 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Mmp1bQ9EPL6 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Mmp1bQ9EPL6 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Mmp1bQ9EPL6 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Mmp1bQ9EPL6 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Mmp1bQ9EPL6 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC21.15■□□□□ 0.98
Mmp1bQ9EPL6 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Mmp1bQ9EPL6 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Mmp1bQ9EPL6 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Mmp1bQ9EPL6 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Mmp1bQ9EPL6 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Mmp1bQ9EPL6 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC21.11■□□□□ 0.97
Mmp1bQ9EPL6 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Mmp1bQ9EPL6 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Mmp1bQ9EPL6 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Mmp1bQ9EPL6 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Mmp1bQ9EPL6 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Mmp1bQ9EPL6 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.1■□□□□ 0.97
Mmp1bQ9EPL6 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Mmp1bQ9EPL6 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Mmp1bQ9EPL6 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Mmp1bQ9EPL6 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Mmp1bQ9EPL6 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Mmp1bQ9EPL6 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Mmp1bQ9EPL6 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
Mmp1bQ9EPL6 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Mmp1bQ9EPL6 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Mmp1bQ9EPL6 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Mmp1bQ9EPL6 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Mmp1bQ9EPL6 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.04■□□□□ 0.96
Mmp1bQ9EPL6 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.04■□□□□ 0.96
Mmp1bQ9EPL6 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Mmp1bQ9EPL6 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Mmp1bQ9EPL6 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Mmp1bQ9EPL6 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Mmp1bQ9EPL6 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Mmp1bQ9EPL6 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Mmp1bQ9EPL6 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Mmp1bQ9EPL6 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.01■□□□□ 0.95
Mmp1bQ9EPL6 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Mmp1bQ9EPL6 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Mmp1bQ9EPL6 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Mmp1bQ9EPL6 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Mmp1bQ9EPL6 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Mmp1bQ9EPL6 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Mmp1bQ9EPL6 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Mmp1bQ9EPL6 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Mmp1bQ9EPL6 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Mmp1bQ9EPL6 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Mmp1bQ9EPL6 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Mmp1bQ9EPL6 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Mmp1bQ9EPL6 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Mmp1bQ9EPL6 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Mmp1bQ9EPL6 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Mmp1bQ9EPL6 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Mmp1bQ9EPL6 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Mmp1bQ9EPL6 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Mmp1bQ9EPL6 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Mmp1bQ9EPL6 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Mmp1bQ9EPL6 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Mmp1bQ9EPL6 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Mmp1bQ9EPL6 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Mmp1bQ9EPL6 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Mmp1bQ9EPL6 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
Mmp1bQ9EPL6 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Mmp1bQ9EPL6 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Mmp1bQ9EPL6 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Mmp1bQ9EPL6 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Mmp1bQ9EPL6 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Mmp1bQ9EPL6 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Mmp1bQ9EPL6 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms