Protein–RNA interactions for Protein: Q9D9H3

Mbd3l1, Methyl-CpG-binding domain protein 3-like 1, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd3l1Q9D9H3 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Mbd3l1Q9D9H3 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Mbd3l1Q9D9H3 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Mbd3l1Q9D9H3 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.08■□□□□ 0.97
Mbd3l1Q9D9H3 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.08■□□□□ 0.96
Mbd3l1Q9D9H3 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Mbd3l1Q9D9H3 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Mbd3l1Q9D9H3 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Mbd3l1Q9D9H3 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC21.05■□□□□ 0.96
Mbd3l1Q9D9H3 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.05■□□□□ 0.96
Mbd3l1Q9D9H3 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Mbd3l1Q9D9H3 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.05■□□□□ 0.96
Mbd3l1Q9D9H3 Gm27325-201ENSMUST00000175467 74 ntBASIC21.05■□□□□ 0.96
Mbd3l1Q9D9H3 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC21.05■□□□□ 0.96
Mbd3l1Q9D9H3 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Mbd3l1Q9D9H3 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Mbd3l1Q9D9H3 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Mbd3l1Q9D9H3 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Mbd3l1Q9D9H3 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
Mbd3l1Q9D9H3 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Mbd3l1Q9D9H3 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Mbd3l1Q9D9H3 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Mbd3l1Q9D9H3 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Mbd3l1Q9D9H3 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Mbd3l1Q9D9H3 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Mbd3l1Q9D9H3 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
Mbd3l1Q9D9H3 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
Mbd3l1Q9D9H3 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC21■□□□□ 0.95
Mbd3l1Q9D9H3 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Mbd3l1Q9D9H3 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Mbd3l1Q9D9H3 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Mbd3l1Q9D9H3 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Mbd3l1Q9D9H3 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Mbd3l1Q9D9H3 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Mbd3l1Q9D9H3 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Mbd3l1Q9D9H3 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Mbd3l1Q9D9H3 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Mbd3l1Q9D9H3 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Mbd3l1Q9D9H3 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Mbd3l1Q9D9H3 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Mbd3l1Q9D9H3 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Mbd3l1Q9D9H3 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
Mbd3l1Q9D9H3 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Mbd3l1Q9D9H3 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Mbd3l1Q9D9H3 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.95■□□□□ 0.94
Mbd3l1Q9D9H3 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
Mbd3l1Q9D9H3 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Mbd3l1Q9D9H3 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Mbd3l1Q9D9H3 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Mbd3l1Q9D9H3 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Mbd3l1Q9D9H3 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Mbd3l1Q9D9H3 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Mbd3l1Q9D9H3 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Mbd3l1Q9D9H3 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.9■□□□□ 0.94
Mbd3l1Q9D9H3 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Mbd3l1Q9D9H3 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Mbd3l1Q9D9H3 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC20.9■□□□□ 0.94
Mbd3l1Q9D9H3 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Mbd3l1Q9D9H3 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Mbd3l1Q9D9H3 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.9■□□□□ 0.94
Mbd3l1Q9D9H3 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
Mbd3l1Q9D9H3 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Mbd3l1Q9D9H3 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Mbd3l1Q9D9H3 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Mbd3l1Q9D9H3 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Mbd3l1Q9D9H3 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Mbd3l1Q9D9H3 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Mbd3l1Q9D9H3 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Mbd3l1Q9D9H3 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Mbd3l1Q9D9H3 Mipep-204ENSMUST00000225043 1548 ntBASIC20.85■□□□□ 0.93
Mbd3l1Q9D9H3 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Mbd3l1Q9D9H3 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Mbd3l1Q9D9H3 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Mbd3l1Q9D9H3 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Mbd3l1Q9D9H3 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Mbd3l1Q9D9H3 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Mbd3l1Q9D9H3 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Mbd3l1Q9D9H3 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Mbd3l1Q9D9H3 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Mbd3l1Q9D9H3 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.82■□□□□ 0.92
Mbd3l1Q9D9H3 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Mbd3l1Q9D9H3 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.81■□□□□ 0.92
Mbd3l1Q9D9H3 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Mbd3l1Q9D9H3 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Mbd3l1Q9D9H3 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Mbd3l1Q9D9H3 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Mbd3l1Q9D9H3 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Mbd3l1Q9D9H3 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Mbd3l1Q9D9H3 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Mbd3l1Q9D9H3 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Mbd3l1Q9D9H3 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Mbd3l1Q9D9H3 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Mbd3l1Q9D9H3 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Mbd3l1Q9D9H3 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Mbd3l1Q9D9H3 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Mbd3l1Q9D9H3 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Mbd3l1Q9D9H3 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Mbd3l1Q9D9H3 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Mbd3l1Q9D9H3 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Mbd3l1Q9D9H3 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 9.7 ms