Protein–RNA interactions for Protein: Q9D6I0

Rtl8c, Cxx1c protein, mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl8cQ9D6I0 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rtl8cQ9D6I0 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
Rtl8cQ9D6I0 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rtl8cQ9D6I0 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rtl8cQ9D6I0 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.68■■□□□ 1.06
Rtl8cQ9D6I0 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rtl8cQ9D6I0 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rtl8cQ9D6I0 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Rtl8cQ9D6I0 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rtl8cQ9D6I0 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rtl8cQ9D6I0 Amer2-203ENSMUST00000225247 2662 ntBASIC21.67■■□□□ 1.06
Rtl8cQ9D6I0 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Rtl8cQ9D6I0 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Rtl8cQ9D6I0 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.67■■□□□ 1.06
Rtl8cQ9D6I0 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Rtl8cQ9D6I0 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rtl8cQ9D6I0 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rtl8cQ9D6I0 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.65■■□□□ 1.06
Rtl8cQ9D6I0 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rtl8cQ9D6I0 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
Rtl8cQ9D6I0 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.63■■□□□ 1.05
Rtl8cQ9D6I0 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Rtl8cQ9D6I0 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rtl8cQ9D6I0 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC21.62■■□□□ 1.05
Rtl8cQ9D6I0 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC21.62■■□□□ 1.05
Rtl8cQ9D6I0 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC21.62■■□□□ 1.05
Rtl8cQ9D6I0 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rtl8cQ9D6I0 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rtl8cQ9D6I0 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rtl8cQ9D6I0 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rtl8cQ9D6I0 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rtl8cQ9D6I0 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Rtl8cQ9D6I0 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rtl8cQ9D6I0 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.58■■□□□ 1.05
Rtl8cQ9D6I0 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rtl8cQ9D6I0 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC21.58■■□□□ 1.05
Rtl8cQ9D6I0 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Rtl8cQ9D6I0 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rtl8cQ9D6I0 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rtl8cQ9D6I0 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.56■■□□□ 1.04
Rtl8cQ9D6I0 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.56■■□□□ 1.04
Rtl8cQ9D6I0 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rtl8cQ9D6I0 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rtl8cQ9D6I0 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rtl8cQ9D6I0 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Rtl8cQ9D6I0 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rtl8cQ9D6I0 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.54■■□□□ 1.04
Rtl8cQ9D6I0 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rtl8cQ9D6I0 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rtl8cQ9D6I0 Gm45855-201ENSMUST00000212546 880 ntBASIC21.54■■□□□ 1.04
Rtl8cQ9D6I0 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rtl8cQ9D6I0 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rtl8cQ9D6I0 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rtl8cQ9D6I0 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC21.53■■□□□ 1.04
Rtl8cQ9D6I0 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.52■■□□□ 1.04
Rtl8cQ9D6I0 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Rtl8cQ9D6I0 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Rtl8cQ9D6I0 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Rtl8cQ9D6I0 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rtl8cQ9D6I0 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rtl8cQ9D6I0 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Rtl8cQ9D6I0 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.5■■□□□ 1.03
Rtl8cQ9D6I0 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rtl8cQ9D6I0 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rtl8cQ9D6I0 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rtl8cQ9D6I0 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rtl8cQ9D6I0 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.47■■□□□ 1.03
Rtl8cQ9D6I0 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rtl8cQ9D6I0 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.47■■□□□ 1.03
Rtl8cQ9D6I0 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.47■■□□□ 1.03
Rtl8cQ9D6I0 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rtl8cQ9D6I0 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rtl8cQ9D6I0 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rtl8cQ9D6I0 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Rtl8cQ9D6I0 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Rtl8cQ9D6I0 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rtl8cQ9D6I0 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Rtl8cQ9D6I0 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rtl8cQ9D6I0 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Rtl8cQ9D6I0 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Rtl8cQ9D6I0 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rtl8cQ9D6I0 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC21.4■■□□□ 1.02
Rtl8cQ9D6I0 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Rtl8cQ9D6I0 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.4■■□□□ 1.02
Rtl8cQ9D6I0 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Rtl8cQ9D6I0 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Rtl8cQ9D6I0 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rtl8cQ9D6I0 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rtl8cQ9D6I0 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rtl8cQ9D6I0 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rtl8cQ9D6I0 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rtl8cQ9D6I0 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rtl8cQ9D6I0 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rtl8cQ9D6I0 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rtl8cQ9D6I0 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
Rtl8cQ9D6I0 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rtl8cQ9D6I0 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rtl8cQ9D6I0 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rtl8cQ9D6I0 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Rtl8cQ9D6I0 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms