Protein–RNA interactions for Protein: Q9CYQ5

Hcfc1r1, Host cell factor C1 regulator 1, mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc1r1Q9CYQ5 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Hcfc1r1Q9CYQ5 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hcfc1r1Q9CYQ5 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Hcfc1r1Q9CYQ5 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hcfc1r1Q9CYQ5 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.96
Hcfc1r1Q9CYQ5 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Hcfc1r1Q9CYQ5 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.01■□□□□ 0.95
Hcfc1r1Q9CYQ5 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
Hcfc1r1Q9CYQ5 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Hcfc1r1Q9CYQ5 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hcfc1r1Q9CYQ5 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21■□□□□ 0.95
Hcfc1r1Q9CYQ5 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Hcfc1r1Q9CYQ5 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hcfc1r1Q9CYQ5 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hcfc1r1Q9CYQ5 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hcfc1r1Q9CYQ5 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Hcfc1r1Q9CYQ5 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Hcfc1r1Q9CYQ5 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hcfc1r1Q9CYQ5 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hcfc1r1Q9CYQ5 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hcfc1r1Q9CYQ5 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Hcfc1r1Q9CYQ5 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.95■□□□□ 0.94
Hcfc1r1Q9CYQ5 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hcfc1r1Q9CYQ5 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hcfc1r1Q9CYQ5 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hcfc1r1Q9CYQ5 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hcfc1r1Q9CYQ5 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Hcfc1r1Q9CYQ5 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Hcfc1r1Q9CYQ5 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hcfc1r1Q9CYQ5 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.93■□□□□ 0.94
Hcfc1r1Q9CYQ5 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hcfc1r1Q9CYQ5 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hcfc1r1Q9CYQ5 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hcfc1r1Q9CYQ5 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hcfc1r1Q9CYQ5 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.92■□□□□ 0.94
Hcfc1r1Q9CYQ5 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hcfc1r1Q9CYQ5 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hcfc1r1Q9CYQ5 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hcfc1r1Q9CYQ5 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hcfc1r1Q9CYQ5 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Hcfc1r1Q9CYQ5 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hcfc1r1Q9CYQ5 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Hcfc1r1Q9CYQ5 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC20.89■□□□□ 0.93
Hcfc1r1Q9CYQ5 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.89■□□□□ 0.93
Hcfc1r1Q9CYQ5 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hcfc1r1Q9CYQ5 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Hcfc1r1Q9CYQ5 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hcfc1r1Q9CYQ5 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hcfc1r1Q9CYQ5 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Hcfc1r1Q9CYQ5 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hcfc1r1Q9CYQ5 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hcfc1r1Q9CYQ5 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hcfc1r1Q9CYQ5 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Hcfc1r1Q9CYQ5 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Hcfc1r1Q9CYQ5 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hcfc1r1Q9CYQ5 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Hcfc1r1Q9CYQ5 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Hcfc1r1Q9CYQ5 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hcfc1r1Q9CYQ5 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hcfc1r1Q9CYQ5 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Hcfc1r1Q9CYQ5 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Hcfc1r1Q9CYQ5 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Hcfc1r1Q9CYQ5 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hcfc1r1Q9CYQ5 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hcfc1r1Q9CYQ5 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hcfc1r1Q9CYQ5 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hcfc1r1Q9CYQ5 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hcfc1r1Q9CYQ5 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Hcfc1r1Q9CYQ5 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hcfc1r1Q9CYQ5 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.79■□□□□ 0.92
Hcfc1r1Q9CYQ5 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hcfc1r1Q9CYQ5 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Hcfc1r1Q9CYQ5 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hcfc1r1Q9CYQ5 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hcfc1r1Q9CYQ5 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.78■□□□□ 0.92
Hcfc1r1Q9CYQ5 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Hcfc1r1Q9CYQ5 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hcfc1r1Q9CYQ5 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hcfc1r1Q9CYQ5 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Hcfc1r1Q9CYQ5 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hcfc1r1Q9CYQ5 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hcfc1r1Q9CYQ5 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Hcfc1r1Q9CYQ5 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Hcfc1r1Q9CYQ5 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hcfc1r1Q9CYQ5 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Hcfc1r1Q9CYQ5 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hcfc1r1Q9CYQ5 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Hcfc1r1Q9CYQ5 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hcfc1r1Q9CYQ5 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hcfc1r1Q9CYQ5 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hcfc1r1Q9CYQ5 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hcfc1r1Q9CYQ5 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hcfc1r1Q9CYQ5 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.69■□□□□ 0.9
Hcfc1r1Q9CYQ5 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Hcfc1r1Q9CYQ5 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hcfc1r1Q9CYQ5 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hcfc1r1Q9CYQ5 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hcfc1r1Q9CYQ5 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hcfc1r1Q9CYQ5 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Hcfc1r1Q9CYQ5 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms