Protein–RNA interactions for Protein: Q9CXK8

Nip7, 60S ribosome subunit biogenesis protein NIP7 homolog, mousemouse

Known RBP Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nip7Q9CXK8 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC31.11■■■□□ 2.57
Nip7Q9CXK8 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC31.11■■■□□ 2.57
Nip7Q9CXK8 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC31.1■■■□□ 2.57
Nip7Q9CXK8 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC31.1■■■□□ 2.57
Nip7Q9CXK8 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC31.07■■■□□ 2.56
Nip7Q9CXK8 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC31.07■■■□□ 2.56
Nip7Q9CXK8 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC31.07■■■□□ 2.56
Nip7Q9CXK8 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC31.06■■■□□ 2.56
Nip7Q9CXK8 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
Nip7Q9CXK8 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Nip7Q9CXK8 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC31.05■■■□□ 2.56
Nip7Q9CXK8 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Nip7Q9CXK8 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
Nip7Q9CXK8 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
Nip7Q9CXK8 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC31.02■■■□□ 2.56
Nip7Q9CXK8 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC31.01■■■□□ 2.55
Nip7Q9CXK8 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Nip7Q9CXK8 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Nip7Q9CXK8 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Nip7Q9CXK8 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC30.99■■■□□ 2.55
Nip7Q9CXK8 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Nip7Q9CXK8 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC30.98■■■□□ 2.55
Nip7Q9CXK8 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Nip7Q9CXK8 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC30.96■■■□□ 2.55
Nip7Q9CXK8 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
Nip7Q9CXK8 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Nip7Q9CXK8 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Nip7Q9CXK8 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC30.92■■■□□ 2.54
Nip7Q9CXK8 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC30.92■■■□□ 2.54
Nip7Q9CXK8 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC30.92■■■□□ 2.54
Nip7Q9CXK8 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
Nip7Q9CXK8 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
Nip7Q9CXK8 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Nip7Q9CXK8 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC30.91■■■□□ 2.54
Nip7Q9CXK8 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Nip7Q9CXK8 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
Nip7Q9CXK8 Gm6345-201ENSMUST00000180378 1691 ntBASIC30.89■■■□□ 2.54
Nip7Q9CXK8 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
Nip7Q9CXK8 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC30.89■■■□□ 2.54
Nip7Q9CXK8 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC30.88■■■□□ 2.53
Nip7Q9CXK8 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Nip7Q9CXK8 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Nip7Q9CXK8 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
Nip7Q9CXK8 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC30.86■■■□□ 2.53
Nip7Q9CXK8 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
Nip7Q9CXK8 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC30.85■■■□□ 2.53
Nip7Q9CXK8 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC30.85■■■□□ 2.53
Nip7Q9CXK8 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC30.85■■■□□ 2.53
Nip7Q9CXK8 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC30.85■■■□□ 2.53
Nip7Q9CXK8 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC30.84■■■□□ 2.53
Nip7Q9CXK8 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Nip7Q9CXK8 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC30.82■■■□□ 2.52
Nip7Q9CXK8 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC30.81■■■□□ 2.52
Nip7Q9CXK8 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
Nip7Q9CXK8 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
Nip7Q9CXK8 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC30.79■■■□□ 2.52
Nip7Q9CXK8 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC30.79■■■□□ 2.52
Nip7Q9CXK8 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC30.79■■■□□ 2.52
Nip7Q9CXK8 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
Nip7Q9CXK8 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
Nip7Q9CXK8 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC30.77■■■□□ 2.52
Nip7Q9CXK8 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
Nip7Q9CXK8 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
Nip7Q9CXK8 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC30.77■■■□□ 2.52
Nip7Q9CXK8 Gm11175-201ENSMUST00000116172 543 ntBASIC30.74■■■□□ 2.51
Nip7Q9CXK8 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC30.73■■■□□ 2.51
Nip7Q9CXK8 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC30.73■■■□□ 2.51
Nip7Q9CXK8 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Nip7Q9CXK8 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC30.72■■■□□ 2.51
Nip7Q9CXK8 AC131739.1-201ENSMUST00000221692 1245 ntBASIC30.72■■■□□ 2.51
Nip7Q9CXK8 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC30.7■■■□□ 2.51
Nip7Q9CXK8 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC30.7■■■□□ 2.5
Nip7Q9CXK8 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Nip7Q9CXK8 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC30.67■■■□□ 2.5
Nip7Q9CXK8 Mir6538-201ENSMUST00000183713 110 ntBASIC30.67■■■□□ 2.5
Nip7Q9CXK8 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
Nip7Q9CXK8 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
Nip7Q9CXK8 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Nip7Q9CXK8 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Nip7Q9CXK8 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC30.65■■■□□ 2.5
Nip7Q9CXK8 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Nip7Q9CXK8 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Nip7Q9CXK8 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Nip7Q9CXK8 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
Nip7Q9CXK8 Gm30023-201ENSMUST00000197970 889 ntBASIC30.63■■■□□ 2.49
Nip7Q9CXK8 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC30.63■■■□□ 2.49
Nip7Q9CXK8 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
Nip7Q9CXK8 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC30.63■■■□□ 2.49
Nip7Q9CXK8 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
Nip7Q9CXK8 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
Nip7Q9CXK8 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Nip7Q9CXK8 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC30.6■■■□□ 2.49
Nip7Q9CXK8 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
Nip7Q9CXK8 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
Nip7Q9CXK8 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
Nip7Q9CXK8 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Nip7Q9CXK8 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC30.57■■■□□ 2.48
Nip7Q9CXK8 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC30.57■■■□□ 2.48
Nip7Q9CXK8 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
Nip7Q9CXK8 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC30.56■■■□□ 2.48
Retrieved 100 of 76,532 protein–RNA pairs in 85.2 ms