Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC23.63■■□□□ 1.37
Pcdhga4Q91XY4 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Pcdhga4Q91XY4 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Pcdhga4Q91XY4 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Pcdhga4Q91XY4 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Pcdhga4Q91XY4 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
Pcdhga4Q91XY4 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Pcdhga4Q91XY4 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Pcdhga4Q91XY4 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Pcdhga4Q91XY4 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Pcdhga4Q91XY4 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Pcdhga4Q91XY4 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC23.59■■□□□ 1.37
Pcdhga4Q91XY4 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
Pcdhga4Q91XY4 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC23.58■■□□□ 1.36
Pcdhga4Q91XY4 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
Pcdhga4Q91XY4 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
Pcdhga4Q91XY4 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
Pcdhga4Q91XY4 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Pcdhga4Q91XY4 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Pcdhga4Q91XY4 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
Pcdhga4Q91XY4 Gm9939-201ENSMUST00000067161 1154 ntBASIC23.55■■□□□ 1.36
Pcdhga4Q91XY4 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Pcdhga4Q91XY4 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Pcdhga4Q91XY4 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Pcdhga4Q91XY4 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Pcdhga4Q91XY4 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
Pcdhga4Q91XY4 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Pcdhga4Q91XY4 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC23.53■■□□□ 1.36
Pcdhga4Q91XY4 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Pcdhga4Q91XY4 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Pcdhga4Q91XY4 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC23.52■■□□□ 1.36
Pcdhga4Q91XY4 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC23.52■■□□□ 1.36
Pcdhga4Q91XY4 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Pcdhga4Q91XY4 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Pcdhga4Q91XY4 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Pcdhga4Q91XY4 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
Pcdhga4Q91XY4 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Pcdhga4Q91XY4 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Pcdhga4Q91XY4 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Pcdhga4Q91XY4 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
Pcdhga4Q91XY4 Gm6821-201ENSMUST00000107540 542 ntBASIC23.45■■□□□ 1.34
Pcdhga4Q91XY4 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Pcdhga4Q91XY4 Gm8503-201ENSMUST00000118131 455 ntBASIC23.44■■□□□ 1.34
Pcdhga4Q91XY4 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Pcdhga4Q91XY4 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Pcdhga4Q91XY4 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Pcdhga4Q91XY4 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Pcdhga4Q91XY4 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Pcdhga4Q91XY4 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
Pcdhga4Q91XY4 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Pcdhga4Q91XY4 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
Pcdhga4Q91XY4 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC23.41■■□□□ 1.34
Pcdhga4Q91XY4 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Pcdhga4Q91XY4 Gm43445-201ENSMUST00000198564 2091 ntBASIC23.4■■□□□ 1.34
Pcdhga4Q91XY4 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Pcdhga4Q91XY4 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Pcdhga4Q91XY4 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Pcdhga4Q91XY4 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC23.4■■□□□ 1.34
Pcdhga4Q91XY4 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Pcdhga4Q91XY4 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC23.4■■□□□ 1.34
Pcdhga4Q91XY4 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
Pcdhga4Q91XY4 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Pcdhga4Q91XY4 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
Pcdhga4Q91XY4 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
Pcdhga4Q91XY4 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Pcdhga4Q91XY4 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Pcdhga4Q91XY4 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Pcdhga4Q91XY4 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
Pcdhga4Q91XY4 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
Pcdhga4Q91XY4 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Pcdhga4Q91XY4 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Pcdhga4Q91XY4 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
Pcdhga4Q91XY4 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC23.37■■□□□ 1.33
Pcdhga4Q91XY4 Nkain2-201ENSMUST00000092602 558 ntBASIC23.37■■□□□ 1.33
Pcdhga4Q91XY4 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Pcdhga4Q91XY4 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Pcdhga4Q91XY4 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Pcdhga4Q91XY4 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Pcdhga4Q91XY4 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Pcdhga4Q91XY4 Gm42809-201ENSMUST00000198429 1138 ntBASIC23.34■■□□□ 1.33
Pcdhga4Q91XY4 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC23.34■■□□□ 1.33
Pcdhga4Q91XY4 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Pcdhga4Q91XY4 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
Pcdhga4Q91XY4 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Pcdhga4Q91XY4 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Pcdhga4Q91XY4 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Pcdhga4Q91XY4 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Pcdhga4Q91XY4 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Pcdhga4Q91XY4 Amer2-203ENSMUST00000225247 2662 ntBASIC23.31■■□□□ 1.32
Pcdhga4Q91XY4 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC23.31■■□□□ 1.32
Pcdhga4Q91XY4 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Pcdhga4Q91XY4 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Pcdhga4Q91XY4 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Pcdhga4Q91XY4 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
Pcdhga4Q91XY4 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC23.29■■□□□ 1.32
Pcdhga4Q91XY4 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Pcdhga4Q91XY4 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Pcdhga4Q91XY4 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Pcdhga4Q91XY4 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Pcdhga4Q91XY4 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms